Gene Caci_2639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2639 
Symbol 
ID8333988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand+ 
Start bp3023132 
End bp3023767 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content70% 
IMG OID644955790 
ProductGTP cyclohydrolase I 
Protein accessionYP_003113396 
Protein GI256391832 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0530307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.512289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACG ACACCTGGCT CGTGGACCAC GAGAGCCCGA TCCTCCGTCC CGCCCCGCTG 
CGGGTGGTCA AGCAGGCCGA CGGCGTCGAT CTCGCCGCCG CGGAACGGGC CGCCGCGCAG 
TTCCTGCACG CGCTCGGCGT CGACACCGAG ACCGAGAGCA TGCACGGCAC GCCCCGGCGG 
ATGGCCCGCG CCTACGCCGA CCTGTTCAGC CCGCGCGCCT TCGACCTGAC CACCTTCCCG 
AACGAGGAAG GCTACGACGA GCTGGTCCTG GCCCGTTCCA TACCGATGCG CTCGGTGTGC 
GAACACCATC TGCTGCCGTT CACCGGCACC GCCCACGTCG GCTACCTGCC CGGGAAGCGG 
ATCCTGGGGC TGTCGAAGCT GGCCCGCGTG GTCGAGCACT TCGCCTGCCG TCCGCAAGTG 
CAGGAGCGCC TCACCAAGCA GATCGCCGAC TGGCTGCAGG CTCAGCTGTC CCCGAAGGGG 
GTCGGCGTCG TCATCGAGGC CGAGCACACG TGCATGACGC TGCGCGGCGT GCAGGCCACC 
GGGTCCACGA CCGTGACGTC GACGCTGCTG GGGCTGCTGC GCCACGATCC GAGTTCGCGC 
AGCGAGTTTC TGGCTCTCAC CGGGGTCTCG CGGTGA
 
Protein sequence
MTNDTWLVDH ESPILRPAPL RVVKQADGVD LAAAERAAAQ FLHALGVDTE TESMHGTPRR 
MARAYADLFS PRAFDLTTFP NEEGYDELVL ARSIPMRSVC EHHLLPFTGT AHVGYLPGKR 
ILGLSKLARV VEHFACRPQV QERLTKQIAD WLQAQLSPKG VGVVIEAEHT CMTLRGVQAT 
GSTTVTSTLL GLLRHDPSSR SEFLALTGVS R