Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2638 |
Symbol | |
ID | 8333987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3022264 |
End bp | 3022998 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644955789 |
Product | putative transcriptional regulator |
Protein accession | YP_003113395 |
Protein GI | 256391831 |
COG category | [K] Transcription |
COG ID | [COG2345] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0318909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.537278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCG CAGCGACGCC GCCGGAACCC ACCGCGGAGA ACCGCGTCGA GTCCGTCGCG GTCCTGACCG ACGGCCAGCG CCGCCGGGTC TTCGGCTTCG TCCGCCGCGC CCGGCGCCCG GTCACCCGCG AGGAGGTGGC CGCCGACTCC GGGGTCTCGG TCAAACTCGC CGCCTTCCAC CTCGACAAAC TCGTCGAAGC CGGCCTGCTG CGCACGCGTT ACGAGACCCC CGCCGGAGTC CGCAAAGTCG GCCGCCGCCC CAAGGTCTAC GAACCGACCG GCACCGACAT CCACATCAGC ATCCCCGAGC GCCGCCCCGA CGTGATCGCC GAAATCCTCA TCGACGCGGT ACTGACCGAA CACCAGGAGG GCAGCGCCCG CGCCGCCGCC CTGCGCACCG CCCACCGCCG CGGCCACGAC GTGGGATCGG CCGAGCGCGC CCGCACCCGC CCCGGCCGGC TCGGTCCGGA ACGCTCCCTC AACGCCGTCG AACCCGTCCT GGAGTCATAC GGCTTCGAAC CCGACCGCCA AGCACCCACC ACACTGCGCC TGCTCAACTG CCCGTTCCAC CACCTCACCG CCCGCGACAC CGAACTGGTC TGCGGCATCA ACCACGCCTT CCTGACCGGC GTCCTCGACG GCCTGGAGAC CACCGGCATC AACGCCGTCC TCGCCCCCCA CCCCGGCCGC TGCTGCGTCG AATTCTGCGA GCCCGGCGCC GACGCCGGCG CCTGA
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Protein sequence | MTTAATPPEP TAENRVESVA VLTDGQRRRV FGFVRRARRP VTREEVAADS GVSVKLAAFH LDKLVEAGLL RTRYETPAGV RKVGRRPKVY EPTGTDIHIS IPERRPDVIA EILIDAVLTE HQEGSARAAA LRTAHRRGHD VGSAERARTR PGRLGPERSL NAVEPVLESY GFEPDRQAPT TLRLLNCPFH HLTARDTELV CGINHAFLTG VLDGLETTGI NAVLAPHPGR CCVEFCEPGA DAGA
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