Gene Caci_2638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2638 
Symbol 
ID8333987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3022264 
End bp3022998 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content73% 
IMG OID644955789 
Productputative transcriptional regulator 
Protein accessionYP_003113395 
Protein GI256391831 
COG category[K] Transcription 
COG ID[COG2345] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0318909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.537278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG CAGCGACGCC GCCGGAACCC ACCGCGGAGA ACCGCGTCGA GTCCGTCGCG 
GTCCTGACCG ACGGCCAGCG CCGCCGGGTC TTCGGCTTCG TCCGCCGCGC CCGGCGCCCG
GTCACCCGCG AGGAGGTGGC CGCCGACTCC GGGGTCTCGG TCAAACTCGC CGCCTTCCAC
CTCGACAAAC TCGTCGAAGC CGGCCTGCTG CGCACGCGTT ACGAGACCCC CGCCGGAGTC
CGCAAAGTCG GCCGCCGCCC CAAGGTCTAC GAACCGACCG GCACCGACAT CCACATCAGC
ATCCCCGAGC GCCGCCCCGA CGTGATCGCC GAAATCCTCA TCGACGCGGT ACTGACCGAA
CACCAGGAGG GCAGCGCCCG CGCCGCCGCC CTGCGCACCG CCCACCGCCG CGGCCACGAC
GTGGGATCGG CCGAGCGCGC CCGCACCCGC CCCGGCCGGC TCGGTCCGGA ACGCTCCCTC
AACGCCGTCG AACCCGTCCT GGAGTCATAC GGCTTCGAAC CCGACCGCCA AGCACCCACC
ACACTGCGCC TGCTCAACTG CCCGTTCCAC CACCTCACCG CCCGCGACAC CGAACTGGTC
TGCGGCATCA ACCACGCCTT CCTGACCGGC GTCCTCGACG GCCTGGAGAC CACCGGCATC
AACGCCGTCC TCGCCCCCCA CCCCGGCCGC TGCTGCGTCG AATTCTGCGA GCCCGGCGCC
GACGCCGGCG CCTGA
 
Protein sequence
MTTAATPPEP TAENRVESVA VLTDGQRRRV FGFVRRARRP VTREEVAADS GVSVKLAAFH 
LDKLVEAGLL RTRYETPAGV RKVGRRPKVY EPTGTDIHIS IPERRPDVIA EILIDAVLTE
HQEGSARAAA LRTAHRRGHD VGSAERARTR PGRLGPERSL NAVEPVLESY GFEPDRQAPT
TLRLLNCPFH HLTARDTELV CGINHAFLTG VLDGLETTGI NAVLAPHPGR CCVEFCEPGA
DAGA