Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2637 |
Symbol | |
ID | 8333986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3020694 |
End bp | 3022091 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644955788 |
Product | Ricin B lectin |
Protein accession | YP_003113394 |
Protein GI | 256391830 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.352697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCC CCATCCGCGG CAAGCGCTTC GGAGTCTGGC TCGCCGTGAT TCCGACCGCG GCCGTGACCG TGGCGGCGGC CGGCGGCATA GCCATGGCCA CCGGGAGCGC GTCCGCGCAG GCTGCGGCGT CGTACCCGGC CCACTACTCC GCGCCGTATC TCCAGCTCGA CGGTTCGGAC TCCGGTGACA TGGTCGCCGA CATGAACGCC AGCGGCGACA AGTTCTACAC GCTGGCCTTC CTGACGCCGA AGTCCGGCTG CACGGCGCAG TGGGAGGGCG GCGGCGAGGC GATGAACGCC TTCACCTCGC AGGTCACCAC CCTCAAGAAC GACGGCGGCA ACGTCATCCT CTCCTTCGGC GGGGAGCCGA ACGGCAACAC GCCGAACGAG ATCGCGCAGA CCTGTACCAG CGTCAGCTCG CTGACGGCCG CGTACCTGAA CATCGTCAAC ACCTACGGCG TCAACCGGCT CGACTTCGAC ATCGAGGGCA GCGTGCTGGC GGACACCGCG GCGACGAGCC GCCGGGACCA GGCGCTGGCC GCGCTCCAGG CCGAGGACCC GGCCGTGCAG ATCGACTTCA CGCTCGCCGT CGATCCCGGC GGTCTGCCCA CCGGCAACGC CTCGGAGTAC GCGCTGCTCC AGGACGCGAA GAACGCGAAG GTCAAGGTCA GCGTCGTGAA CATCATGACG ATGGACTTCT ACGACGGGAA GTCCGTGCTC TCCGACGCCG AGTCCGCGGC GAAGGCGACC GCGGGCCAGC TCGCCGGGCT CTACGGCGTC TCGACCTCGG CCGCCTACGG CATGATGGGC CTGACCCCGA TCGCCGGCAC CAACGACGAC GGCGCCCCCT TCAGCCAGGC CAACGCCTCC AGCCTGGAGT CCTTCGCGGC TTCCAACGGT GTGCAGGAGC TGGCCTTCTG GGAGGTCGAC GGCTACGACA AGGGCACCGG CTACGCCTAC TCCAAGATCT TCCAGAAGAT CGCGAGCGGC GGCACGACCC CGCCGCCCCC GACCGGTCAC ACCGTCGTCA ACAACAACTC CGGGACCTGC CTGAGCGTGT CCGGCGCGTC GACCTCGCCC GGCGCCACCG CTGACATCTA CACCTGCAAC AGCAGCCCGG GGCAGAGCTG GACGGTGAAC AGCAACGGCA CGATCACCGG CAACGGCTCG GGCCTGTGCC TGAGCACCTC CGGGAACAAC CCCGCCCTGA AGACCACCGC GGACATCAAC ACCTGCGACG GCGACGCCTA CGAGAAGTGG ACCGTCTCCG GCGGCACGAT CGTCAACGGC GCCTCGGGCC TGTGCCTGAG CATCACCGGC GGTGCCACCG CGAACTACTC CCTCGCCGAC CTGTACACCT GCAACGGCAG CGTCAGCGAG AACTGGACCG TCGGCTGA
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Protein sequence | MKVPIRGKRF GVWLAVIPTA AVTVAAAGGI AMATGSASAQ AAASYPAHYS APYLQLDGSD SGDMVADMNA SGDKFYTLAF LTPKSGCTAQ WEGGGEAMNA FTSQVTTLKN DGGNVILSFG GEPNGNTPNE IAQTCTSVSS LTAAYLNIVN TYGVNRLDFD IEGSVLADTA ATSRRDQALA ALQAEDPAVQ IDFTLAVDPG GLPTGNASEY ALLQDAKNAK VKVSVVNIMT MDFYDGKSVL SDAESAAKAT AGQLAGLYGV STSAAYGMMG LTPIAGTNDD GAPFSQANAS SLESFAASNG VQELAFWEVD GYDKGTGYAY SKIFQKIASG GTTPPPPTGH TVVNNNSGTC LSVSGASTSP GATADIYTCN SSPGQSWTVN SNGTITGNGS GLCLSTSGNN PALKTTADIN TCDGDAYEKW TVSGGTIVNG ASGLCLSITG GATANYSLAD LYTCNGSVSE NWTVG
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