Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2630 |
Symbol | |
ID | 8333979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3014933 |
End bp | 3015256 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644955782 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_003113388 |
Protein GI | 256391824 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.692225 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGAGT TCTCCTACCG GGTCCGCGAG CAGGACCAGG TCAGCGTGGT CGAGGTGTCC GGGGACGTGG ACATGTCCGT GGCCGGGCAG CTCAGCGAGG CGTTGGAGCA GTTGGTGCCG GTCGGGGACG TGGTCCTGGA CTGCACGGGT GTGACGTTCT TCGACTCCAT GGGCCTGCGG GTGGCCGTGA ACGCGTTGAA CCAGGCCGCG CAGGCCGGCA CGGCGTTCTC GCTGGTGCCC TCGCACACGG TCGCGCGAGT ATTGGAGCTG GCCGGGGTGA CCTCGATCTT CGTCATCCAC GACAGCGTCC CGACCTCCGC GTGA
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Protein sequence | MPEFSYRVRE QDQVSVVEVS GDVDMSVAGQ LSEALEQLVP VGDVVLDCTG VTFFDSMGLR VAVNALNQAA QAGTAFSLVP SHTVARVLEL AGVTSIFVIH DSVPTSA
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