Gene Caci_2630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2630 
Symbol 
ID8333979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3014933 
End bp3015256 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content68% 
IMG OID644955782 
Productanti-sigma-factor antagonist 
Protein accessionYP_003113388 
Protein GI256391824 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.692225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAGT TCTCCTACCG GGTCCGCGAG CAGGACCAGG TCAGCGTGGT CGAGGTGTCC 
GGGGACGTGG ACATGTCCGT GGCCGGGCAG CTCAGCGAGG CGTTGGAGCA GTTGGTGCCG
GTCGGGGACG TGGTCCTGGA CTGCACGGGT GTGACGTTCT TCGACTCCAT GGGCCTGCGG
GTGGCCGTGA ACGCGTTGAA CCAGGCCGCG CAGGCCGGCA CGGCGTTCTC GCTGGTGCCC
TCGCACACGG TCGCGCGAGT ATTGGAGCTG GCCGGGGTGA CCTCGATCTT CGTCATCCAC
GACAGCGTCC CGACCTCCGC GTGA
 
Protein sequence
MPEFSYRVRE QDQVSVVEVS GDVDMSVAGQ LSEALEQLVP VGDVVLDCTG VTFFDSMGLR 
VAVNALNQAA QAGTAFSLVP SHTVARVLEL AGVTSIFVIH DSVPTSA