Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2564 |
Symbol | |
ID | 8333913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2903953 |
End bp | 2904696 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644955717 |
Product | cell surface receptor IPT/TIG domain protein |
Protein accession | YP_003113323 |
Protein GI | 256391759 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.168937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATCT CCCCGAACCA GGGATCCACC GGCGGCGGGA CCGTCGTCAC CATCACCGGA GTCAATCTCG GCGGCGCCAC CGCGGTGTTC TTCGGCACCG AGCCGGCCAT CATCACCGCG AACACGCCCA CCTCGGTCAC GGTCGTCTCG CCGTCCGGCG CCGGGGCGGT GGAAGTGACC GTGACCACGG CGGGCGGCAC CAGCAACCCG CTCTCGTTCT TCTACGTGGA AGCGCCGTTC AAAAGCGGTC TGAGCGCGAG CTCCGGACCG ACGGCGGGCG GAAACACCAT CGCCATCAGC GGTATCGGCT TCGCGACCGC CAGCAGCGTC GGGTTCGGCT CGGCCAGTGC GGTGCCGACC GTGGTGTCCG ACGGCCTGAT CGACGTCGTC GTCCCCGCCG CGGGGTCGGC CGGGACCGTC GGGCTCACCG TCACCACCGC CGGCGGCAGC AACAACGGGT TCTCCTACAC CTACGTCGAT TCCCCGACCG TCAGCGCCGT CACCCCCACC TCCGGCTCGA CCTCCGGAGG CACCGTGGTG ACGCTCACCG GCACCAACCT CGCCACCACC CAGTCGGTCA CCATCAGCGG GACCCTCGCG CCGTTCACAG TCGTCAACGG CGCCGAGATG TCCATCGTCA CCCCGGCCGG CACCGTCGGA GCCGCCGACG TGGACGTCAC CACGACCGGC GGCACAGCGA CCTTGGCGGG CGGCTACACC TACGTCGCCG CACCTGGAAT CTGA
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Protein sequence | MPISPNQGST GGGTVVTITG VNLGGATAVF FGTEPAIITA NTPTSVTVVS PSGAGAVEVT VTTAGGTSNP LSFFYVEAPF KSGLSASSGP TAGGNTIAIS GIGFATASSV GFGSASAVPT VVSDGLIDVV VPAAGSAGTV GLTVTTAGGS NNGFSYTYVD SPTVSAVTPT SGSTSGGTVV TLTGTNLATT QSVTISGTLA PFTVVNGAEM SIVTPAGTVG AADVDVTTTG GTATLAGGYT YVAAPGI
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