| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2563 |
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| Symbol | |
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| ID | 8333912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2902604 |
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| End bp | 2903614 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644955716 |
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| Product | cell surface receptor IPT/TIG domain protein |
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| Protein accession | YP_003113322 |
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| Protein GI | 256391758 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.23893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCAG TCATCAGCAG CATCAGCCCG GTTCAGGGCC CTGCCGCCGG AGGGACGGCC
GTCACGGTCA CCGGAACCGG CTTCACGGGT GTGACCGGGG TGAAGTTCGG TTCCGCGGCG
GCGGCGTACG TCGTGGTCAG CGCCACCAAG ATCACCGCCA CCGCACCCGC CGGTTCCGGC
GCGCCATCGG TGACGGTGAC GACGCCGGGC GGGACCAGCA ACGGCGTCAC CTACACCTAC
GTGGCGGCGC CGGTGGTGAG CAGCGTCAGT CCGACACAAG GCCCGACAAC AGGCGGGAAC
ACCGTCACCG TCACAGGGAC CGGATTCACG GGCGCCACCA GCGTGTTGTT CGGCTCGGTA
TCGGTGGCGT TCACCGTGGT CAGCGCCACC CAGATCACCG CGACGGCGCC TGCGGCACCG
GTCGCCCCGG TCGCGGTCAC CGTCGTCACC CCCGGAGGCA CGAGCAACGG GGTGTTGTAC
TTCTACGTCC CACCGCCGAC GGTGGCCACC GTCTCGCCCT CGATGGGTCC GGTCGCCGGC
GGGAACACCG TCACCATCAC CGGTACCAGC CTGACGCTCG CCACGGCCGT CCGATTCGGA
ACCGGCGCTG CCACGGCGCT CACGGTCGTC TCGGACGATC AGATCACGGT CCAAGCTCCC
AGCGGTTCCG GGACTGTCGC CGTCACGGTC ACCACGCCGG GCGGCACGAG CCTGCCGGGG
GTGGGCAGCG CCTCCTACAC CTACGTGCCG CTCCCGGTCA TCAACGCCCT CACCCCTTCG
CAGGTACCGA CGAGCGGCGG AAGCGCGGTC ACCATCAGCG GAAGCAGCCT CGGCCTGGCG
CAATCCGTCC TGATCGGCGG AGCCGCAGCG CCCTTCGTCG CCATCTCGGA CAGCGAACTC
GTGGCCATCA GCCCGAGCGG CGCCCCCGGC CCGGTCACCG TCAAGGTCAC CACGCCGGGC
GGCGTCAGCA ACACCGCCAC CTACCAGCTG GTCGCCGGCC CACTCATCTG A
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| Protein sequence | MAPVISSISP VQGPAAGGTA VTVTGTGFTG VTGVKFGSAA AAYVVVSATK ITATAPAGSG
APSVTVTTPG GTSNGVTYTY VAAPVVSSVS PTQGPTTGGN TVTVTGTGFT GATSVLFGSV
SVAFTVVSAT QITATAPAAP VAPVAVTVVT PGGTSNGVLY FYVPPPTVAT VSPSMGPVAG
GNTVTITGTS LTLATAVRFG TGAATALTVV SDDQITVQAP SGSGTVAVTV TTPGGTSLPG
VGSASYTYVP LPVINALTPS QVPTSGGSAV TISGSSLGLA QSVLIGGAAA PFVAISDSEL
VAISPSGAPG PVTVKVTTPG GVSNTATYQL VAGPLI
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