| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2562 |
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| Symbol | |
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| ID | 8333911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2901691 |
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| End bp | 2902611 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644955715 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003113321 |
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| Protein GI | 256391757 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0914693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCGA TCAGCACCCT CATTCGCATG GCCCGGCTGG ACGGCGTCGT CGACGTCCGC
TGCTTGCTCA CCGGAAGCCA CGTCCTGGAC AACCCGCCGA CGTCCGGCCG CGTACCCTTC
CACCTCCTGC TGGACGGATA CTGCACGGCC GAGATCGACG GACACACCAT CGACCTGCGA
CCCGGCGACG TGCTCGTCCT CCCGCGCGGC GGAGAACACC GCGTCCGGGT CACGACCGAG
GCGCCGGCCG TGCCCGCCGA CCTCCGCCAG GGCGCCTCGG TGGCGACCCT GGCCAGCTCC
AGCGCCGATG CCTCGACCAT CGACCTGTTC TGCGGCCACT ACACCTACCA GCCGGGCGCC
GGAGAGCTCC TGATCGCCGG ACTGCCCGAC ATCCTCCACG CCTCCTTCGG CACCGGTCCC
GACTCCCCGC TCCGCCTCCT CGGCGAGCTG ATGCGCAGCG AAGCAGGACT CGACGGCCCC
GGAGCCGGCG CCCTGCTGGC GTCGCTGTGC GAAGCGCTGC TCGCCCTGGT GCTGCGCGGA
GACGGCACCG GCCACCCGGC GACCACGACC CTGCCCACCC CCTGGACCGC CGTCGCCGTC
ACCGACCCCG GCCTGCGCGC CGTGATCGAC GCCGTCGTGC ACCGCCCGCG GGAACCGTGG
ACGATCGCGG TCCTCGCGCA CCTCGCCGGC GTCTCCCGCG CCACCCTGGT CCGGCACTTC
TCCGCCGCGA CCGGCATGGG CGTCGCCGAC TTCCTCACCC GGATCAGGAT GACGATAGCC
GCCGACCTGC TGACCACCAC CGACCGCAGC CTCGACGCCG TCGCCGAAGC CGTCGGCTAC
CAGTCGACGT CCGCCTTCGG CAAAGCCTTC CGCACCGCCA CCGGCACCAC CCCGTCGCGC
CTGCGCCGAG CCGTCAGATG A
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| Protein sequence | MDAISTLIRM ARLDGVVDVR CLLTGSHVLD NPPTSGRVPF HLLLDGYCTA EIDGHTIDLR
PGDVLVLPRG GEHRVRVTTE APAVPADLRQ GASVATLASS SADASTIDLF CGHYTYQPGA
GELLIAGLPD ILHASFGTGP DSPLRLLGEL MRSEAGLDGP GAGALLASLC EALLALVLRG
DGTGHPATTT LPTPWTAVAV TDPGLRAVID AVVHRPREPW TIAVLAHLAG VSRATLVRHF
SAATGMGVAD FLTRIRMTIA ADLLTTTDRS LDAVAEAVGY QSTSAFGKAF RTATGTTPSR
LRRAVR
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