| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2560 |
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| Symbol | |
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| ID | 8333909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2898946 |
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| End bp | 2900166 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644955713 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_003113319 |
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| Protein GI | 256391755 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.910753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCC CCACTCTGGA ACGTCCCACT GTTGCCGTCC GGCAGCACCA AGATCTCATC
CAGGTCGCCG GCATCCTCGA TCGCCAGGAT CAGCACGGAT TCCTGCGGAC CACGGGCTAC
CTGCCCGGGC CCGAGGACGT GTTCGTGCCG CCCGACCTGA TCCGTCGCCA TGGACTGCGG
TCCGGCGATG TCATCGAAGG CGCCGCCACC CAATCGTCGC CGGCCACGTC AGCCAAGTCA
GCCAAGCCAG CCAAGTCAGC CAGGTCAGCC AACTCATCCA AAGCCCGTCC GCTGGTCCGC
GTCGACGCGG TCAACGGCAG GCCGTCCGAC GAATCAGCCG CCAGACCGCA CTTCGCCGCG
ATGACGCCGA TCCATCCCCA GGAGCGACTG CGGCTCGCCG GCGACACCAG CCGGGTCAGC
ACGCGGATCA TCGACCTGAT CGCACCGATC GGCAAAGGTC AGCGAGGCCT GATCGTCGCC
CCGCCCAAGA CCGGAAAAAC CATGCTCCTG CAGGCGATCG CCGCGGGCGT GACCGCGAAC
CACCCCGAGT GCCACCTGAT GGTCGTGCTC TTGGACGAGC GCCCCGAAGA GGTCACCGAC
ATGCGCCGGA CGGTGGACGG CGAAGTCCTC GCCTCCACCT TCGACCGCCC GATCCACGAG
CACATCGCCA TCGCCGAGCT CGCCGTCGAG CGCGCCAAGC GCCTTGCCGA GCAGGGCCAG
GACGTCGTCA TCCTCCTGGA CTCCATCACC CGGCTGTGCC GAGCGCACAA CAACAACGCC
AAGTCCAGCG GCCGCACCCT GTCCGGCGGC GTCGACGCCT CAGCGGTGGC GGCGCCCAAG
AAGCTCTTCG GCGCCGCCCG CAACCTCGAG GAAGGCGGCT CGGTCACCAT CCTGGCCACC
GCCCTGGTCG ACACCGGATC CCGAGCCGAC GACTACTTCT TCGAAGAACT CAAAAGCACC
GGGAGCATGG AACTGCGCCT GGACCGCAGC CTCGCCGACA AGCGCGTCTT CCCCGCCCTC
GACGTCGCCG CCTCCGGCAC CCGCCGCGAA GAACTCCTGA TGCCCCCGGC CGAACTCGAC
GCCGTCCGCA AACTCCGCCG CGTCCTCACC GCCCGCACCA ACCAGCAAGC CGTCGAGCTC
CTGCTGGAAG GAGCCAAGCA GAACGCCGGC AACAGCGAGT TCCTCTGGCG TATCACGCAT
TCGAGCTCGT CAGCATCCTG A
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| Protein sequence | MSAPTLERPT VAVRQHQDLI QVAGILDRQD QHGFLRTTGY LPGPEDVFVP PDLIRRHGLR
SGDVIEGAAT QSSPATSAKS AKPAKSARSA NSSKARPLVR VDAVNGRPSD ESAARPHFAA
MTPIHPQERL RLAGDTSRVS TRIIDLIAPI GKGQRGLIVA PPKTGKTMLL QAIAAGVTAN
HPECHLMVVL LDERPEEVTD MRRTVDGEVL ASTFDRPIHE HIAIAELAVE RAKRLAEQGQ
DVVILLDSIT RLCRAHNNNA KSSGRTLSGG VDASAVAAPK KLFGAARNLE EGGSVTILAT
ALVDTGSRAD DYFFEELKST GSMELRLDRS LADKRVFPAL DVAASGTRRE ELLMPPAELD
AVRKLRRVLT ARTNQQAVEL LLEGAKQNAG NSEFLWRITH SSSSAS
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