| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2536 |
|---|
| Symbol | |
|---|
| ID | 8333885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 2866006 |
|---|
| End bp | 2867100 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644955689 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_003113295 |
|---|
| Protein GI | 256391731 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGAGCCG CGGTCATCGG AGTGGGCATC CTCGGGTCCA GCGTGGGCTG GAACCTGGCC
CGGCGCGGCG CCGAGGTGAT CCTCCTCGAC GCCGGGCGGC CCGGGGAAGG CGTCACCGAC
TGGACCTTCT CGTGGGTCAA CGCCAGCAAC AAGACCGTGC GCCGGTCCTA CTTCGACCTC
AACGTGGCGG GCGTCGCCGA ATACCGCGAG CTCGCCGAGG TCATCGGGCC GGACTCGTGG
TGGTATCCCG GCGGCCATCT GCGGTGGGCG GACGATCCTG CCGCGCAGGC CAAATGGCTG
GGGATCGCCG AGCTGCTGAC CAGGTGGGAC TATCCGGTCG AGATCCTGAC CGGCGAGCAG
GCGCGGCGCC TGGAACCGGC GCTCACGATG TCCGAGGCGA CTCCGGTCGT GTTCTATCCC
GACGAAGCGT GGGTCCACGG ACGCCGCCTC GTCGGGCGTC TGGTGGCTGA GGCTGTTGCC
GCGGGCGCCG AGTGCCGTTT CGACAGCGCG GTCCGTGACA TCGGCACCAG CGCGGACGGA
AGCGTCCGGA CCGTCGTGCT CTCCGACGGG AACAGCCTGG AGGCCGACGT CGTCGTGAAC
GCGACAGGGC CCGCCGCCGC TGAGATCGCC GGGCTGGTCG GACGGGCCCT GCCGATGCGC
TGGGAACCCG GTGCCGTCAC ACGGATCGAC TGCGACCGGG TCCCGATCCA GCGGGTCATG
CACGCGCCTC ATATCGAGAT CCGTCCCGAC GGGGACGCCT CGATGGTCCT GCACAGCCGT
GAGATCGACG CGCTCATCGA CACCGCCGTG AATCCGGCGG AACTCGGGCG GCTGCTCCAG
GACGCGGTGC GCCGCGTCCT TCCCGGGCTT GATAGCTCCC GCATCGTGGA GACGCGGGTA
TCCAATCGGC CCATCCCGGA CGACGGATTC CCCTCAGTGG GAGCAATACC TTCCGTGCCG
GGCTACTACG AAGCCGTGTC GCACAGCGGG ATCACGCTCG GGCCGGTGCT CGGCCGGTTG
CTCGCCGAAG AAATCCTTGG CGGAGCACCG GACGCGCTGC TCGCGGACTT CCGTCCGGAG
CGGTTCACGG CGTGA
|
|---|
| Protein sequence | MRAAVIGVGI LGSSVGWNLA RRGAEVILLD AGRPGEGVTD WTFSWVNASN KTVRRSYFDL
NVAGVAEYRE LAEVIGPDSW WYPGGHLRWA DDPAAQAKWL GIAELLTRWD YPVEILTGEQ
ARRLEPALTM SEATPVVFYP DEAWVHGRRL VGRLVAEAVA AGAECRFDSA VRDIGTSADG
SVRTVVLSDG NSLEADVVVN ATGPAAAEIA GLVGRALPMR WEPGAVTRID CDRVPIQRVM
HAPHIEIRPD GDASMVLHSR EIDALIDTAV NPAELGRLLQ DAVRRVLPGL DSSRIVETRV
SNRPIPDDGF PSVGAIPSVP GYYEAVSHSG ITLGPVLGRL LAEEILGGAP DALLADFRPE
RFTA
|
|---|
| |