Gene Caci_2487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2487 
Symbol 
ID8333836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2812944 
End bp2813333 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content69% 
IMG OID644955640 
ProductEndoribonuclease L-PSP 
Protein accessionYP_003113246 
Protein GI256391682 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGT ACCTGAATCC GGACTCCCTA TCGCGGAACC CGGCTTTCAC CCAGGCCATC 
GTGGTGGAGT CGCCGTCCCG CACGGTCTAT GTCGGCGGCC AGAACGCGAT CACGGCCGAC
GGCACCATCG TCGGCGAAAC GCTCAGCGAA CAGGCCCATC AGGCGCTGCG CAACCTCGAG
GCGGCGTTGG AGGCGGCCGG CGCGAAGCTC ACGGACGTCG TCCGCTGGAA CGTGGCGATC
GTCCAGGGCC AGCCGGTCGG CGAGGGCTTC GGCGCCTTCC GCGAGGCCTG GGGCGACGCC
GGCGACCCGC CGACGATCAC GGTGCATGTG GTCGCCGGTC TGGCCAACCC GCGCTTCCTC
GTGGAGATCG ACGCGATCGC GGTTCTCTAG
 
Protein sequence
MKTYLNPDSL SRNPAFTQAI VVESPSRTVY VGGQNAITAD GTIVGETLSE QAHQALRNLE 
AALEAAGAKL TDVVRWNVAI VQGQPVGEGF GAFREAWGDA GDPPTITVHV VAGLANPRFL
VEIDAIAVL