Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2487 |
Symbol | |
ID | 8333836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2812944 |
End bp | 2813333 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644955640 |
Product | Endoribonuclease L-PSP |
Protein accession | YP_003113246 |
Protein GI | 256391682 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACGT ACCTGAATCC GGACTCCCTA TCGCGGAACC CGGCTTTCAC CCAGGCCATC GTGGTGGAGT CGCCGTCCCG CACGGTCTAT GTCGGCGGCC AGAACGCGAT CACGGCCGAC GGCACCATCG TCGGCGAAAC GCTCAGCGAA CAGGCCCATC AGGCGCTGCG CAACCTCGAG GCGGCGTTGG AGGCGGCCGG CGCGAAGCTC ACGGACGTCG TCCGCTGGAA CGTGGCGATC GTCCAGGGCC AGCCGGTCGG CGAGGGCTTC GGCGCCTTCC GCGAGGCCTG GGGCGACGCC GGCGACCCGC CGACGATCAC GGTGCATGTG GTCGCCGGTC TGGCCAACCC GCGCTTCCTC GTGGAGATCG ACGCGATCGC GGTTCTCTAG
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Protein sequence | MKTYLNPDSL SRNPAFTQAI VVESPSRTVY VGGQNAITAD GTIVGETLSE QAHQALRNLE AALEAAGAKL TDVVRWNVAI VQGQPVGEGF GAFREAWGDA GDPPTITVHV VAGLANPRFL VEIDAIAVL
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