Gene Caci_2484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2484 
Symbol 
ID8333833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2809950 
End bp2811104 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content69% 
IMG OID644955637 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003113243 
Protein GI256391679 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.668988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGG ACACCAGCCG GCGGGAGATG CCCGAGTCCG AACCCGCGGG CATCTTCAGC 
AAGGACCTGC TGGACGCCTG CATCTCCTGC GGATTCTGCC TCCCGGCGTG CCCGACCTAC
GCCCTCACCG GTCAGGAACA GTCCTCCCCG CGCGGCCGCA TCACCTTGAT GCGCCTGCTG
GAAACCGGCG ATCTCGCCGC CGACGACCCC ACCCTCGCCG AGGAGGCCTC GCTCTGCCTG
GGCTGCCGCG CCTGCGAGAC CGTGTGCCCG GCCGGCGTCC AATACGGACA CCTCCTGGAA
GAGTGGCGCG ACGAGCAGTG GAGCGGTTTG AAGCGACCGT GGATCGTTCG GCCGCTGCTG
CTGGTCGCGA ACCGCAAGTG GGTCCTGCGG CTGCTCGGTC TGGTTCGCCG CAGCGCCCGC
AAACGCAGCG GCAGCAGTAG TAGCAGTAGC GGCACATCCG ACCAGCCCAC GCTCATGCTC
GGCTGCTTCG AGCGCGCGCT GTTCCCCTCG GTCAGCCGCA ACATTGCCGC GCTCGACCCG
AACCTCACCG TCGATCCCGA CCAGGGCTGC TGCGGCGCCC TGCACGCGCA CAACGGGGAC
CTCGACCAAG GCCGCGACCT GGCGCGCAAG CTCGGCGAAC AGCTTCCCGG CACGATCGTC
ACCACCAGCG GCGGCTGCGC GGCGCACCTG GCGGACGTGA TCGGCAGGGA CCGCGTCGTC
GAGGCTTCCG AGTGGCTGCT CAAGCAGGAC ACCGCGACTG CGCAAAACAC CGCAGTCGCG
CGAAGCACTG CGACCGAGCA GCGCCCCCTA CGCGTCGGAC TCCAGGACAG CTGCCACCTG
CGCAACGGTC TCGGCGTCTG GAGGGAACCC CGCGAACTCC TCGGCCGCAC CGCCACCTAC
GTCGAGCTGC CCTCCGCCGG CTCCTGCTGC GGCGCCGCCG GGACCTACGC CCTGGTCCGT
AAGAAGGAGA GCAAAGCCAT TCTGGCCAAG AAGATCGCCG AGATCGAGGC GGCGGACCTC
GACCTGGTGA TCGCGGTCAA CCCCGGCTGC CTGCGCCAAC TCCAGACCGG TCTGCGCAAA
GCCAAGAGCC GCACCAAAGC CGTGCACATC GTCGACTACC AGCGAGGCGA CTACCGCCGA
GGCGATAAGG CATGA
 
Protein sequence
MSEDTSRREM PESEPAGIFS KDLLDACISC GFCLPACPTY ALTGQEQSSP RGRITLMRLL 
ETGDLAADDP TLAEEASLCL GCRACETVCP AGVQYGHLLE EWRDEQWSGL KRPWIVRPLL
LVANRKWVLR LLGLVRRSAR KRSGSSSSSS GTSDQPTLML GCFERALFPS VSRNIAALDP
NLTVDPDQGC CGALHAHNGD LDQGRDLARK LGEQLPGTIV TTSGGCAAHL ADVIGRDRVV
EASEWLLKQD TATAQNTAVA RSTATEQRPL RVGLQDSCHL RNGLGVWREP RELLGRTATY
VELPSAGSCC GAAGTYALVR KKESKAILAK KIAEIEAADL DLVIAVNPGC LRQLQTGLRK
AKSRTKAVHI VDYQRGDYRR GDKA