Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2462 |
Symbol | |
ID | 8333811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2782645 |
End bp | 2783730 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644955615 |
Product | prephenate dehydrogenase |
Protein accession | YP_003113221 |
Protein GI | 256391657 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0287] Prephenate dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCTCCG CCCTGGTCGT CGGCACTGGA CTCATCGGCA CGTCCATCGC CTTGGCGTTG ACCCGCCGCG GCATCGACGT GCACCTCAGC GACACCGACG AGGGCGCCGC GCGGACCGCG GCCTCCCTGG GCGCCGGCCA CACCGGCCGC CCCGCGCAGC CGGTCGACCT GTGCATCCTG GCCGTCCCGC CGGCGCGCAT AGGAGCGATG CTGGCGCAGG CGCAGCGCGA GGAGTGGTCC CGCGTCTACA CCGACGTCGG CTCGGTGAAG GCGCTGGTGC ACACCTCCGC CGAGGACGCC GGCGCCGACC TGAGCCGCTT CATCGGCGGC CACCCGCTGG CCGGCCGCGA GCGCTCCGGT CCGCTGGCCG CCCGCTGGGA TCTGTTCGAG GGGCGTCCCT GGGTGCTGAC ACCCGGCGCG ACCACCTCCC GCGACGCCCT GAACCAGGCG CTGGAACTGG TCTCGCTGTG CGGCGCGGTA CCGGTCGTGA TGGACACCGA CGAGCACGAC CACGCCGTGG CCCTGATCTC GCACGCCCCG CACCTGGTCG CCGCGCTGAT GGCGGCGCGC TTGGAGGGCG CCCGCGAGGA GTCGGTGCGC ATCTCCGGTA CCGGTATCCG AGACCTGACA CGCATCGCCG GCGGCGCCCC GGAGCTGTGG GAGGACATCC TCGCCGCCAA CGCCCCGGCG ATCGCCGAGG TCCTCGCCGC CTACGCCACA GACCTCACCG CGGCGGTGGA CGCGCTGCGC GCCGTCGCCG GCCCGGACGC CGAAGCCGCC AAGCGCGGCG CCGCCAACCT GGCCGACCTG CTGCGCCGCG GCAACGCCGG GCAGGCGCGC ATCCCGGGCA AGCACGGAAC GGCTTCGGCC TCTTACACCG CGGTACCGGT GCTGATCTCC GACCGGCCCG GCGAGCTGGC GCGGCTGTTC GCGGCGGCCG GCAGCGTCGG GGTGAACATC GAGGACGTGC GCATCGACCA CTCCCCGGGC CGCGAGGCGG GTCTGGTGGA ACTGCTGGTG GACCCGACCG TGTCCGACCG CCTGGCGGCG GACCTGGCGG CGTCCGGCTG GACGGTTCAG TCCTGA
|
Protein sequence | MRSALVVGTG LIGTSIALAL TRRGIDVHLS DTDEGAARTA ASLGAGHTGR PAQPVDLCIL AVPPARIGAM LAQAQREEWS RVYTDVGSVK ALVHTSAEDA GADLSRFIGG HPLAGRERSG PLAARWDLFE GRPWVLTPGA TTSRDALNQA LELVSLCGAV PVVMDTDEHD HAVALISHAP HLVAALMAAR LEGAREESVR ISGTGIRDLT RIAGGAPELW EDILAANAPA IAEVLAAYAT DLTAAVDALR AVAGPDAEAA KRGAANLADL LRRGNAGQAR IPGKHGTASA SYTAVPVLIS DRPGELARLF AAAGSVGVNI EDVRIDHSPG REAGLVELLV DPTVSDRLAA DLAASGWTVQ S
|
| |