Gene Caci_2462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2462 
Symbol 
ID8333811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2782645 
End bp2783730 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content75% 
IMG OID644955615 
Productprephenate dehydrogenase 
Protein accessionYP_003113221 
Protein GI256391657 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCCG CCCTGGTCGT CGGCACTGGA CTCATCGGCA CGTCCATCGC CTTGGCGTTG 
ACCCGCCGCG GCATCGACGT GCACCTCAGC GACACCGACG AGGGCGCCGC GCGGACCGCG
GCCTCCCTGG GCGCCGGCCA CACCGGCCGC CCCGCGCAGC CGGTCGACCT GTGCATCCTG
GCCGTCCCGC CGGCGCGCAT AGGAGCGATG CTGGCGCAGG CGCAGCGCGA GGAGTGGTCC
CGCGTCTACA CCGACGTCGG CTCGGTGAAG GCGCTGGTGC ACACCTCCGC CGAGGACGCC
GGCGCCGACC TGAGCCGCTT CATCGGCGGC CACCCGCTGG CCGGCCGCGA GCGCTCCGGT
CCGCTGGCCG CCCGCTGGGA TCTGTTCGAG GGGCGTCCCT GGGTGCTGAC ACCCGGCGCG
ACCACCTCCC GCGACGCCCT GAACCAGGCG CTGGAACTGG TCTCGCTGTG CGGCGCGGTA
CCGGTCGTGA TGGACACCGA CGAGCACGAC CACGCCGTGG CCCTGATCTC GCACGCCCCG
CACCTGGTCG CCGCGCTGAT GGCGGCGCGC TTGGAGGGCG CCCGCGAGGA GTCGGTGCGC
ATCTCCGGTA CCGGTATCCG AGACCTGACA CGCATCGCCG GCGGCGCCCC GGAGCTGTGG
GAGGACATCC TCGCCGCCAA CGCCCCGGCG ATCGCCGAGG TCCTCGCCGC CTACGCCACA
GACCTCACCG CGGCGGTGGA CGCGCTGCGC GCCGTCGCCG GCCCGGACGC CGAAGCCGCC
AAGCGCGGCG CCGCCAACCT GGCCGACCTG CTGCGCCGCG GCAACGCCGG GCAGGCGCGC
ATCCCGGGCA AGCACGGAAC GGCTTCGGCC TCTTACACCG CGGTACCGGT GCTGATCTCC
GACCGGCCCG GCGAGCTGGC GCGGCTGTTC GCGGCGGCCG GCAGCGTCGG GGTGAACATC
GAGGACGTGC GCATCGACCA CTCCCCGGGC CGCGAGGCGG GTCTGGTGGA ACTGCTGGTG
GACCCGACCG TGTCCGACCG CCTGGCGGCG GACCTGGCGG CGTCCGGCTG GACGGTTCAG
TCCTGA
 
Protein sequence
MRSALVVGTG LIGTSIALAL TRRGIDVHLS DTDEGAARTA ASLGAGHTGR PAQPVDLCIL 
AVPPARIGAM LAQAQREEWS RVYTDVGSVK ALVHTSAEDA GADLSRFIGG HPLAGRERSG
PLAARWDLFE GRPWVLTPGA TTSRDALNQA LELVSLCGAV PVVMDTDEHD HAVALISHAP
HLVAALMAAR LEGAREESVR ISGTGIRDLT RIAGGAPELW EDILAANAPA IAEVLAAYAT
DLTAAVDALR AVAGPDAEAA KRGAANLADL LRRGNAGQAR IPGKHGTASA SYTAVPVLIS
DRPGELARLF AAAGSVGVNI EDVRIDHSPG REAGLVELLV DPTVSDRLAA DLAASGWTVQ
S