Gene Caci_2435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2435 
Symbol 
ID8333784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2753748 
End bp2754719 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content73% 
IMG OID644955588 
Producthypothetical protein 
Protein accessionYP_003113194 
Protein GI256391630 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG CCGCGGCACA GGTCCGCAGG CTGTTGAACC TGGTGCCCTA CCTGCTGGAG 
CACGAGGGCG CGAAGCTGAC CGAGGTGGCC GGGGAGTTCA ACGTCTCCGA GAAGCAGCTG
CGCAAGGACC TGGAGACGCT CTGGATGTGC GGGTTGCCCG GCGGTCTGCC GGACGACCTG
ATGGAAGCCC ATATCGGCGA GGGCGGCACC ATCCACCTGG AGAACGCCGA GGCGATCGTC
CGTCCTCTGC GTTTCTCGGT GCGCGAGGCC GTCGCGCTGC TGGTCGCCCT GCGCGCTCTG
GCGCAGCTGC CCGGCGTCGC CGACCGCGAC GCCCTGCTGC GGGCCATCGC CAAGCTGGAG
GAGGCCGCCG GCGAGCGCGG CGCGCAGGCC TCGCAGCGCG TGACGGTCGC CTTCGAGGCG
CGCGCCACCG TGCTGGACCG CATCCGCCAG GCCCTGGACA GCGGCCACCG CCTGCGGCTG
GAGTACTTCG TCCCGTCCCG GGACCAGGTC ACCGAGCGCG ACGTGGACCC GATGCGCGTG
ATCCTCTCCG ACGGCCACGC CTACCTGGAG GGCTGGTGCC GCCGCAGCGA GGCGGTGCGC
GTGTTCCGGC TCTCGCGCAT AGTGGCCATC GACGTCCTCG ACATCGCCGC CGAGATCCCG
GAATCGGCCG AACCCCAGGA CCTCGACGAC GGCGTCCTGC GCCCGGCCGC CGACGACCCC
CTGGTCACCC TCGAAGTGAC CCGCCACGCC CGCTGGGTCG CCGAGAACTA CCCGAACGAA
GGCGTCGAGG AACTCCCCGA AGGCGGCCTG CGCATCGCCC TGCGAGCCCC CGACCAGGGC
CGCATCCTCC GCCTGGTCCT CCGCCTCGGC GCCGACGGCC GCATCGTCGA CCCCCCGGCC
CTGGCCGACC AGGTCCGCAA GACCGCCGCC GAAGCCCTCG CCCTCTACGG CGCCGCCGAG
GCCCAGGCGT GA
 
Protein sequence
MSGAAAQVRR LLNLVPYLLE HEGAKLTEVA GEFNVSEKQL RKDLETLWMC GLPGGLPDDL 
MEAHIGEGGT IHLENAEAIV RPLRFSVREA VALLVALRAL AQLPGVADRD ALLRAIAKLE
EAAGERGAQA SQRVTVAFEA RATVLDRIRQ ALDSGHRLRL EYFVPSRDQV TERDVDPMRV
ILSDGHAYLE GWCRRSEAVR VFRLSRIVAI DVLDIAAEIP ESAEPQDLDD GVLRPAADDP
LVTLEVTRHA RWVAENYPNE GVEELPEGGL RIALRAPDQG RILRLVLRLG ADGRIVDPPA
LADQVRKTAA EALALYGAAE AQA