Gene Caci_2391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2391 
Symbol 
ID8333740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2710726 
End bp2711169 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content69% 
IMG OID644955544 
Product3-dehydroquinate dehydratase 
Protein accessionYP_003113150 
Protein GI256391586 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGC AGCGCAAAGT CCTGGTCCTC AACGGCCCGA ACCTGGGCCG CCTCGGCAGC 
CGCGAGCCCG ACGTCTACGG CGCGGTGTCC TACGCCGGGC TGGTCAAGGC GTGCGAGGCG
CTCGGCGCCG AGCTGGGCTT CGACGTCGAG GTGCGCGAGA CCAACGACGA GGGCCAGATC
GTGCGCTGGC TGCACGAGGC CGCCGACGGC CGCATCCCGG TGGTCATCAA CCCCGGCGCC
TTCACGCACT ACTCCTACGC GATGAGCGAC GCCGCCAAGC TGCGCACCGC GCCGCTGATC
GAGGTACACA TCTCCAATCC GCACGCGCGC GAGCAGTTCC GGCACAAGAG CGTCATCGCG
CCGGTGGCCA GCGGAACCAT CGCCGGGTTC GGGATCAACT CTTATCTTCT CGCGCTAAGG
GCCCTGTCTG AGCTGCCGGA GTGA
 
Protein sequence
MSEQRKVLVL NGPNLGRLGS REPDVYGAVS YAGLVKACEA LGAELGFDVE VRETNDEGQI 
VRWLHEAADG RIPVVINPGA FTHYSYAMSD AAKLRTAPLI EVHISNPHAR EQFRHKSVIA
PVASGTIAGF GINSYLLALR ALSELPE