| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2381 |
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| Symbol | aroE |
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| ID | 8333730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2700246 |
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| End bp | 2701067 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644955534 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_003113140 |
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| Protein GI | 256391576 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.429433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | CTGACCCGCC ACGCCGCCGT CCTCGGCTCC CCGATCGCGC ACTCGCTGTC CCCGGTCCTG
CACCGGGCCG CCTACGCCGC GCTCGGCCTC ACCGCCTGGA CCTACGACGC GCACGAGGTC
GACGAGGCGT CGCTCCCGGA CTTCCTGTCC GGGCTCGACG CCTCCTGGGC CGGCCTGTCC
CTGACCATGC CGCTCAAGCG CGCGATCATC CCCCTCCTCG ACGAGGTCAC CCCCACCGCC
CGCGCCGTCG AGGCGGTGAA CACGGTCCTC CTCGCCCCGA ACGGCTCCAG GCAGGGCACG
AACACCGACG TCCCCGGCCT GGTCAACGCC CTGGCCGAAG GCGGCGTGAC CGACGCGGCC
TCGGCAGCCG TCCTCGGCGC GGGCGCGACG GCGTCCTCAG CCCTGTCCGC CCTGTCAGGC
ATCGCCAAGG CCGAAGTCGA GGTCTACATC CGCAACCACG CCCGCGACAC CGAGGTCCAC
GCGATCGCCG ATGCGGTCGG CACCGCCGTG CGCATCCGCG ACTGGACCGA AGCCGCAGCG
GCGTTCGACT GCGAACTGGT CATCGGCACC ACGCCGGTCG GCGCGACGGA CGACCTCGCG
GAGTCGGTCC CGACAGCTCC AGGCACACTG TTCGACGTGC TGTATCACCC GTGGCCGACG
CCGCTGGCCG CCGCCTGGGC GGATCGCGGC GGTGCGGTAC TCGGCGGGCT GGACCTGCTG
GTCCACCAGG CGGTGCTGCA GGTCGAGCTG ATGACGGGGC GCGCGCCGGC GCCGTTGGCG
GCGATGCGGG CTGCGGGAGA AGCGGCGCTG GCTGGGCGGT GA
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| Protein sequence | MTRHAAVLGS PIAHSLSPVL HRAAYAALGL TAWTYDAHEV DEASLPDFLS GLDASWAGLS
LTMPLKRAII PLLDEVTPTA RAVEAVNTVL LAPNGSRQGT NTDVPGLVNA LAEGGVTDAA
SAAVLGAGAT ASSALSALSG IAKAEVEVYI RNHARDTEVH AIADAVGTAV RIRDWTEAAA
AFDCELVIGT TPVGATDDLA ESVPTAPGTL FDVLYHPWPT PLAAAWADRG GAVLGGLDLL
VHQAVLQVEL MTGRAPAPLA AMRAAGEAAL AGR
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