Gene Caci_2355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2355 
Symbol 
ID8333704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2669786 
End bp2670265 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content69% 
IMG OID644955508 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_003113114 
Protein GI256391550 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.458983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATCTC CCGTTTTCCT GATCTGGATC GTCCTGATCG GGGCCATGTT CTACTTCATG 
ATGATCCGGC CGCAGAAGCG GGCGCGTGCG AACCAGTCGG ACATGCTGCA GCATCTGCAG
CCCGGCGCGC AGGTGCGGAC CACCGCCCAG ATCATGGGCA CCATCGTCGA GGTCGGTGAC
GACTGGGCCA TCGTGGAGAC CACCCCGGGG ACGCGCATCA AGTTCGGCAA GCCCGCGATC
GTCGGCGTCA TCCTGGACGA CGAGGCCCAG GACGAGACCG AGGACGCCGA GTCGGGCCAG
GACGCCCCGA CGCCCGGCGG CATCGGCGAC GCCCCGCACG GCGACACGGT TCCGGCCCAG
GACACCGCGC CCGTCCAGGA CGCCGTGCCC GCCGGGGCGG ACTCCGAGAA GGCCGAGGCG
GACTCCGTCT CGTCCGAGAC CTCCGAGGAG GTCAAGGACG GAGAGCCTGC GAAATCGTGA
 
Protein sequence
MGSPVFLIWI VLIGAMFYFM MIRPQKRARA NQSDMLQHLQ PGAQVRTTAQ IMGTIVEVGD 
DWAIVETTPG TRIKFGKPAI VGVILDDEAQ DETEDAESGQ DAPTPGGIGD APHGDTVPAQ
DTAPVQDAVP AGADSEKAEA DSVSSETSEE VKDGEPAKS