Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2355 |
Symbol | |
ID | 8333704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2669786 |
End bp | 2670265 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644955508 |
Product | preprotein translocase, YajC subunit |
Protein accession | YP_003113114 |
Protein GI | 256391550 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1862] Preprotein translocase subunit YajC |
TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.458983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATCTC CCGTTTTCCT GATCTGGATC GTCCTGATCG GGGCCATGTT CTACTTCATG ATGATCCGGC CGCAGAAGCG GGCGCGTGCG AACCAGTCGG ACATGCTGCA GCATCTGCAG CCCGGCGCGC AGGTGCGGAC CACCGCCCAG ATCATGGGCA CCATCGTCGA GGTCGGTGAC GACTGGGCCA TCGTGGAGAC CACCCCGGGG ACGCGCATCA AGTTCGGCAA GCCCGCGATC GTCGGCGTCA TCCTGGACGA CGAGGCCCAG GACGAGACCG AGGACGCCGA GTCGGGCCAG GACGCCCCGA CGCCCGGCGG CATCGGCGAC GCCCCGCACG GCGACACGGT TCCGGCCCAG GACACCGCGC CCGTCCAGGA CGCCGTGCCC GCCGGGGCGG ACTCCGAGAA GGCCGAGGCG GACTCCGTCT CGTCCGAGAC CTCCGAGGAG GTCAAGGACG GAGAGCCTGC GAAATCGTGA
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Protein sequence | MGSPVFLIWI VLIGAMFYFM MIRPQKRARA NQSDMLQHLQ PGAQVRTTAQ IMGTIVEVGD DWAIVETTPG TRIKFGKPAI VGVILDDEAQ DETEDAESGQ DAPTPGGIGD APHGDTVPAQ DTAPVQDAVP AGADSEKAEA DSVSSETSEE VKDGEPAKS
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