Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2236 |
Symbol | |
ID | 8333585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2537815 |
End bp | 2538372 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644955389 |
Product | hypothetical protein |
Protein accession | YP_003112995 |
Protein GI | 256391431 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000422278 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00000960297 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGACATAG AACCCGCCCC CTGCCGCTGT CTGCTGTGCC AGCCCGCGAC CCCCGACGAG TCGCAGTGGG ACCCGCGCGA CCGCGCGATC GCCACCAACG TCCGCGACCA CGGCTGGCAC ATCATGGGCG TCACCGGCGA CGACACCCCG GACTGGGCCT ACTCCATCGG CATGTGGCAC ACCCACGGCG GCTACGACAT CTGCATGACA GGCCTCCCCG TCGAGAACGC CATGGCCCTG GTCGCCAAGA TCGCCGTCCA GGTCCGCGAA GGCCGAGCAC TCGGCGCCGA GAAGCGCCGC CTGAACGTCA TCGAAGGCTA CGAAGTCGCC ACCCGCCCAG TCCACCAGAG CTGGTACCCC GCCATGTTCG GCGCAGGCCT CGACTTCTTC CAAACGCCCC CATGGCCGAT GCTGCAGGCA GTCTGGCCGG ACCGCCAGGG CCGCTTTCCC TGGGAGCAAG GCGCGGACCC GGAGCGCCAA GACCAGCAGC CCTTCCTCTG GCTGGCCCGG AACGAGCACC CGGACAGCGT CTGGGTGTCC TCTTCCCTGA CTTTGTAG
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Protein sequence | MDIEPAPCRC LLCQPATPDE SQWDPRDRAI ATNVRDHGWH IMGVTGDDTP DWAYSIGMWH THGGYDICMT GLPVENAMAL VAKIAVQVRE GRALGAEKRR LNVIEGYEVA TRPVHQSWYP AMFGAGLDFF QTPPWPMLQA VWPDRQGRFP WEQGADPERQ DQQPFLWLAR NEHPDSVWVS SSLTL
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