Gene Caci_2208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2208 
Symbol 
ID8333553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2503468 
End bp2504538 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content66% 
IMG OID644955358 
Producthypothetical protein 
Protein accessionYP_003112968 
Protein GI256391404 
COG category[S] Function unknown 
COG ID[COG2899] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGAC GGGACTTCGG TGTCGCCTAC GGTGCCACCC TCCTGGGATT AGTGCTCGCT 
CTGTGGCTCG GCGGCATCCG ATCGGCGACC GTCGTGGCGA TGCTGGCGGT GCTGGAGGTG
GCTCTGTCCT TTGACAACGC GGTCGTGAAC GCGACGGTGT TGCGCCGGTT CGACCTGCGC
TGGCAACGCA TCTTCCTCAC AGTCGGCGTG TTGATCGCGG TCTTCGGGAT GCGTTTGGTC
ATCCCGATGG CGGTGCTGGT CGCGGTCACC CGGCAGAGCC CGTTTCATGT ACTGAGCAGC
TCCGTCCACG ATCCGAACGG CTACGCCCAC GAGATCCTCG GGGTGCAACC GCTGATCGCG
GCGTTCGGCG GGGTCTTCCT GCTGATGATC GCCATGGACT TCTTCCTCAG CGGGCACGAC
CTGATCTGGC TGCCGTTCTT CGAGCGGCGG CTGGCCGCGT TCGGCGAGCG CTTCAAGCCG
CTGGCGCTGG AAGCCTTCCA GGTGGTCGGC GTCGTGCTCT TCCTGTTCGT CGCGGCGGGG
ACCTTCGCGA CCGACCATCC GGTGGGCGTC CCGATCGCGG GCGTCATCGG GCTGGCCACG
TACTTCACCA TCAAGCGGCT CTCGGATGCC GCGGCGGACC GCAGCGAGTC GCTGGCCGAC
GAGGCGGACG AGACGCCACC GCAAGGCCGC CAAGCTTTGA TGCTCTTCAT ATACCTGGAA
GTCCTTGACG CCACCTTCTC CTTCGACAGC GTCATGGGTG GCTTCTCCGT CACCGTCGAC
ATCGCGCTGT TCACCATCGG CCTGGGCATC GGCGCCGCGT ATGTCCGCAG CCTGACGGTG
TTCCTGGTCC GCAAGAAGAC GCTCGACCGG TACGTCTACC TCGAACACGG CGCGTACTAC
TCGATCGGCG TGCTCGCGGT ATTGCTGCTG GTGGAGATCG GCCCGGACGT GCCGGACTGG
CTCGCCTCGG TCGCGGGCAC CTCGATGATC GTGGCGGCCT TCATCCATTC GGCGGTGAAG
GCAAAGGGGG AAGACCCGGC GGGCGCGGAG CACCCAGCGC TGAAATCCTG A
 
Protein sequence
MRGRDFGVAY GATLLGLVLA LWLGGIRSAT VVAMLAVLEV ALSFDNAVVN ATVLRRFDLR 
WQRIFLTVGV LIAVFGMRLV IPMAVLVAVT RQSPFHVLSS SVHDPNGYAH EILGVQPLIA
AFGGVFLLMI AMDFFLSGHD LIWLPFFERR LAAFGERFKP LALEAFQVVG VVLFLFVAAG
TFATDHPVGV PIAGVIGLAT YFTIKRLSDA AADRSESLAD EADETPPQGR QALMLFIYLE
VLDATFSFDS VMGGFSVTVD IALFTIGLGI GAAYVRSLTV FLVRKKTLDR YVYLEHGAYY
SIGVLAVLLL VEIGPDVPDW LASVAGTSMI VAAFIHSAVK AKGEDPAGAE HPALKS