Gene Caci_2205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2205 
Symbol 
ID8333550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2500154 
End bp2500894 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content71% 
IMG OID644955355 
Productbeta-lactamase domain protein 
Protein accessionYP_003112965 
Protein GI256391401 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTGA CGGTGTTGGG CGGCAGCGGC GCGTTTCCGA CGGCTGACAG CGCGTGCAGC 
GGGTTCCTCC TACACCACGA CGGGTTCTCC CTTCTGGTCG ATGCGGGCTA CGCAGTCCTG
CCGCGTCTTC TGGAACTGAT GCCGGCCGAG CAGTTGGACG CCGTCTACAT CAGCCATGGT
CATCCGGACC ACTGCGCCGA TCTCAATCCC CTGCTTCGCG CCCGGGCGTT CGGCGGAGCC
GACCCCGATC CGCTGCCGGT GTACGCGCCG CCCAGGGCCC TGGACGCCGT ACTCGCACTG
GACCGGCCCG GCATGCTCGA CGCAGCGCTG ACCCGCCACG ACTTCGAGCC GGGAGCGGCC
TTCTCCGTCG GACCGTTCGA GCTACGGACC GCGCTGCTGC CGCACTGGCT GCCCAACGCG
GCGGTGCGCG TCGCAGCCGG CGGCCACTCT GTCGTCTACA CCGGCGACGG CGGTCCGGAC
CCCGCGCTCG TCGAGTTGGC GCGGGGCGCG GACACGCTCA TCGCGGAGGC CTCGTATCCG
GAAGTGATGG ACGCCGATTC CGTCCGCTAC CTGTCGACCG CCCGGCAGGT GGCACGGCAG
GCGAGCGAAG CTGGGGTGGG CAGGCTGGTG CTGACGCACC TGATGCCTGG CTCAGAGCCG
GGGGAGTACC TCGACGCCGC GGCGAAGGAG TACACCGGGC GCACCGGCGT CGCCACCGGC
GGCCTGTCCT TCGACGCCTA G
 
Protein sequence
MRVTVLGGSG AFPTADSACS GFLLHHDGFS LLVDAGYAVL PRLLELMPAE QLDAVYISHG 
HPDHCADLNP LLRARAFGGA DPDPLPVYAP PRALDAVLAL DRPGMLDAAL TRHDFEPGAA
FSVGPFELRT ALLPHWLPNA AVRVAAGGHS VVYTGDGGPD PALVELARGA DTLIAEASYP
EVMDADSVRY LSTARQVARQ ASEAGVGRLV LTHLMPGSEP GEYLDAAAKE YTGRTGVATG
GLSFDA