Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2196 |
Symbol | |
ID | 8333541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2490465 |
End bp | 2491199 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644955346 |
Product | MgtC/SapB transporter |
Protein accession | YP_003112956 |
Protein GI | 256391392 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTCAG TGGGGTCCGT CCTACTGGCG GCCGTTCCGT CGGCCGACAA CATCCACGTC CCGACCCACT GGGACGCGGT CGGGCGCATC GCCCTGGCCT GGGCGCTGAC CTTCGCGCTG GGCTTCGAGC GGCAGATCCG CGGCGCGATG GCCGGGGACC GGACCTTCTC GCTGCTGGGC GCGGCCACGG CGCTGATAGG CGTGCTGGCC GGCAACGGCG CCAGCACCAT CCTGGCCGGC GCGGTCACCG GCATCGGCTT CATCGGCGGC GGGCTGTGCT TCCGGCAGAC CGTCCAGGAG CACGAGGTGC TGCACGGCAT CACCACCGCG GCGAGCATCT TCGCCTGCTC GGCGATCGGC GCGGCGTGCG GCCTGGGACT GGTGAAGGAG TCGATCACCG CGACCGCGGC CACGCTGCTC ACCCTGGAGC TGCGCCACAT CCCGCTGATC CGCACGCTCG ACGCGCGCCG CTGGAACGGC CTGGTGCACC ACGACGAGCA TGTGCACTCG CAGATCCTCA AGCGCGGCAC CAGGATCTCC TCGCAGATGG CCGAGGCCCG GGTGGCGACC GCCGACACCG CGGACAGCGA CGCCGTGGTG CTCATCAACC CGGTGATCGC CGCGCAGCAG GCGGCCGCGG CCACGGCGGC GACGGTCATG CCCGAGGCGC CGGTGATGGT CGACGCCGTG GCGGCCGACA GCGGCGCGGC CGCGACACCG GCCGGGAAGC AGTAG
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Protein sequence | MHSVGSVLLA AVPSADNIHV PTHWDAVGRI ALAWALTFAL GFERQIRGAM AGDRTFSLLG AATALIGVLA GNGASTILAG AVTGIGFIGG GLCFRQTVQE HEVLHGITTA ASIFACSAIG AACGLGLVKE SITATAATLL TLELRHIPLI RTLDARRWNG LVHHDEHVHS QILKRGTRIS SQMAEARVAT ADTADSDAVV LINPVIAAQQ AAAATAATVM PEAPVMVDAV AADSGAAATP AGKQ
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