| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2168 |
|---|
| Symbol | |
|---|
| ID | 8333513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 2459878 |
|---|
| End bp | 2460840 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644955318 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003112928 |
|---|
| Protein GI | 256391364 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGGTCG TCTTCCTGCT CATCCCGCGC CTGCACCTGC TGGACCTCTC CGGTCCGGCC
CAGGTGTTCT CCACCGCCGA CGATCTCGGG TTCCCGTACG AGCTGCGGTA CTGCGCCGAG
CAGGAGGACA TCGTCAGCGC GCAGGGCGTC CGGCTGCGCG CGGAGACCGC GTGGCCCGGC
GCCGGCCCGG AGGATCTGGT CATGGTCCCG GGCTGGCGCT CGCCGACGCT CAAGGGCGGT
CCGCGCCCCG GCCGGGGCTT GCTGGCCCGG CTGGTCGCGC ACCACGCCGC CGGCGGCACC
GTGGCCAGCG TCTGCTCCGG CGCCGACGTG CTGGGCCAGG CCGGGCTGCT GGACGGCCGG
CGCTGCACCA CCCACCACGA TCTGCGGGAC GAACTCGCCG CGCGCTATCC CCGGGCCCGG
GTCGAGCGCG ACGTGGTCTA CGTCGCCGAC GGCCGGGTGG TGACCTCGGC CGGCATCGCC
AGCGGGATCG ACCTGGCGCT GCACCTGGTC GCCGAGCGCC ACGGCCCGGC GGCCGCCGCC
CGGGTCGCCC GCGACATGGT GGTCTACGCG CGCCGCTCGG GCGAGGAATC TCAGGACAGT
GCGATGCTGC GGCACCGCTG GCATCTGCGC GACGCCGTGC ACCGCGCGCA GGACCGGATC
GACGCGAACT ACGCCGAGCC GCTGCGGCTC ACCGACCTCG CGCGCGCCGG CGGTGTCAGC
GAGCGCACCC TGACCCGGCA GTTCGTCGAG AGCACCGGGA TGACCCCGCT GCGCTACCAG
CAAACCCTGC GCCTGGAACG CGCCGAGCAC CTGATCGGGC ACGGCGCGAC GGTCGAGGCC
GCGGCGCACG CGGTCGGTTT CGCCGACGCC CGCATGCTGC GCCGGCTGCG CTCGCGCGTG
ATGGAGGACA CGCCCTTTGC GCCCTCTCAC GGCGCAACCA CGAGCCCCCG CATAGACGTC
TGA
|
|---|
| Protein sequence | MRVVFLLIPR LHLLDLSGPA QVFSTADDLG FPYELRYCAE QEDIVSAQGV RLRAETAWPG
AGPEDLVMVP GWRSPTLKGG PRPGRGLLAR LVAHHAAGGT VASVCSGADV LGQAGLLDGR
RCTTHHDLRD ELAARYPRAR VERDVVYVAD GRVVTSAGIA SGIDLALHLV AERHGPAAAA
RVARDMVVYA RRSGEESQDS AMLRHRWHLR DAVHRAQDRI DANYAEPLRL TDLARAGGVS
ERTLTRQFVE STGMTPLRYQ QTLRLERAEH LIGHGATVEA AAHAVGFADA RMLRRLRSRV
MEDTPFAPSH GATTSPRIDV
|
|---|
| |