Gene Caci_2150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2150 
Symbol 
ID8333495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2435900 
End bp2437087 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content73% 
IMG OID644955300 
ProductROK family protein 
Protein accessionYP_003112910 
Protein GI256391346 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGACGC CCCCCACGGA GTCCCGTGCC GAGCGCAGCC GACTGGCCGT CGTACGGCTG 
CTGCGCGAGC GCGGGACGAT GAGCCGCGCC GACATAGCCC GCTCGGTCGG ACTGTCCCGC
TCCACGGTCT CCGGCATCAT CGCCGCCCTG GTCGCCGACG ACCTGGTGGT CGAGCTGGAC
GCCAAGCTCG CCCCGGCCGG CGGCGGCGCC GGCCGCCCAG GGGCGGCGGT GATGCTCAAC
CCGGCCAGCG GCGAGGCGAT CGGCGTGGAC TTCGGCTACC GCCACGTCCA CGTGATCATC
GCCAACGTCG CCCACGCCGT CCGCATCGCC AAATCCGTCC GCCTCCCCGT CGGCTACGAC
CCGGCCCAGG GCTTCGACGT CGCCTCCGAC CTGATCCGCA CCGCCATCGA CGAAGCCGGC
ACCGACCCCA GCCGCATCCT CGGCGTGGGC GTCAGCGTCC CGGGTCCCTT CGACACCAAA
CGCGGCGTCC CCAGCTCCGG CATGCCGTCG CGCTGGGCCG GAATCCCCGT GGCCACCGAG
CTCGCCGCAC GCCTGAACCT CCCAGTCCTC GCCGACGGCG ACACCCGCCT GGGCGCCCTG
GCCGAACGCC GCTGGGGCGC AGCCCGGGGC TGCGACGAAT TCGTGTACCT GAAACTGCAC
GGAGGCATCG GCGGAGCGTT CGTCTCCAAC GGCCAACTGG CCCGGGGCAT CAACGGCGGC
GCCGGCGAGA TCGGCCACCT GGTCGTCGAC GCCACCGGTC CCCTGTGCCG CTGCGGCAAC
CGCGGCTGCC TGGAGACCTT CGTCGGCCTC CCGGTGGTGA TGCGCGCCCT GGAACCCGCC
TACGGTGACC GCCTGACCCT CCGCAACGTG ATCACCATGG CCTGGCAGGG CGATCGCGGC
TGCATCAGGG CCCTGTCAGA CGCCGGGACC ATGGCCGGCC GAGCCGTCGG CATGCTCGGC
AACATCCTGA ACCCGCAGAG CGTCATCATC GGCGGCGCCC TGTCCGCGGC GGGAGAACTG
CTGATGGGCC CACTGCGCGA GGCCGCGGCG ACGGCTTCGC TGCCCCTGGC GGGGGATGCG
ATGACACTGC AGGTCGGTTC GCTCGGGCCG CAGGCGTGCG CGCTGGGGGC GGTGGCGATG
GTGCTCGGGG AGACGGATCA GAAGTTGATG GCGGCGCTGG GATCGTAG
 
Protein sequence
MRTPPTESRA ERSRLAVVRL LRERGTMSRA DIARSVGLSR STVSGIIAAL VADDLVVELD 
AKLAPAGGGA GRPGAAVMLN PASGEAIGVD FGYRHVHVII ANVAHAVRIA KSVRLPVGYD
PAQGFDVASD LIRTAIDEAG TDPSRILGVG VSVPGPFDTK RGVPSSGMPS RWAGIPVATE
LAARLNLPVL ADGDTRLGAL AERRWGAARG CDEFVYLKLH GGIGGAFVSN GQLARGINGG
AGEIGHLVVD ATGPLCRCGN RGCLETFVGL PVVMRALEPA YGDRLTLRNV ITMAWQGDRG
CIRALSDAGT MAGRAVGMLG NILNPQSVII GGALSAAGEL LMGPLREAAA TASLPLAGDA
MTLQVGSLGP QACALGAVAM VLGETDQKLM AALGS