Gene Caci_2130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2130 
Symbol 
ID8333475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2416032 
End bp2416559 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content71% 
IMG OID644955280 
ProductNUDIX hydrolase 
Protein accessionYP_003112890 
Protein GI256391326 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTCC ACAACTCGCA CTGCTCCTAC TGCGGTACCG CCTACGTCCC GGAATCCGCG 
TGGCCGCGGG TCTGCGCGAA CTGTGGCGAG ACCACCTGGC TCAACCCGCT GCCGGTGGCG
CTGGTGATGA TGCCGATCAT CGGCGAGGAC GGCCGGACCG GGCTGCTGAC GGTGCGCCGC
GGGATCGAGC CGCAGCTCGG CGAGATCGGC CTGCCCGGCG GCTTCATCGA GGAGGGCGAG
AGCTGGCAGC AGGGGGCGGT GCGCGAGCTG TGGGAGGAGA CCGGGCTGCG CGCCGACGTG
GCCGAGGTGG AGCTCGCCGA CGTGCTGAGC GCCCCCAGCC ACGTGATCCT GCTCTTCGGG
CGGGTCAAGC CGCGCCCGGT CGAGGATCTC GCCGAGCTGA CGGCCGAGCG CGTCCGCACG
CTGTCCAACG GCGAGACGCT GGAATTGGTC GTCGTGGACC ACGCCCAACC CCTGGCGTTC
CCCCTCCACA CCGAGATGAG CGATCGTTTC TTTGCCGCTC TCGGCTGA
 
Protein sequence
MPVHNSHCSY CGTAYVPESA WPRVCANCGE TTWLNPLPVA LVMMPIIGED GRTGLLTVRR 
GIEPQLGEIG LPGGFIEEGE SWQQGAVREL WEETGLRADV AEVELADVLS APSHVILLFG
RVKPRPVEDL AELTAERVRT LSNGETLELV VVDHAQPLAF PLHTEMSDRF FAALG