| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2088 |
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| Symbol | |
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| ID | 8333432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2367919 |
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| End bp | 2370063 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644955237 |
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| Product | WD40 domain protein beta Propeller |
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| Protein accession | YP_003112848 |
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| Protein GI | 256391284 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2247] Putative cell wall-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGTTCG ATCATCTCCG CAAGCCTTTG GCGCTCGCGG CAGTCCTGTC GTCGGCGATC
GCCGGCGCGG CCACGATGGC GCCGGGGGCG AGCGCCGTCA ACCCCGGCGG CGTGCCCGCC
AGGAGCCCGC TGGCCGTGGC CGACGGCACG AACCAGATCG CGCTGACCGG CGGCGGCATG
CTGACCGCGC CGACGAACGT CACCTCGATC GCCTTCTCGC CCAAGGGCGA CCGGTACGCC
TACATCGCCG CCGACAGCTC GGTGCACACG GTGAACCGCG ACGGCAGCGG CGACACCCTC
ATCGCGGCCG CCACCGGCGT GCAGCGGCTG CACCCGACGT GGGGCGACGA CGGCTACACC
GTCGGGTGGA GCGAGCTGTC GGGGGTCGGC AACTCCTCGG TGCTGCGTGT GACAGCCGCG
GACGGGTCCG CGGTGGGCGC CTCGCAGCCG ACGTGGGCGC CGACCGGCTA CACGACGAGC
ACGAACCCTG GCACCGCTTA CAACGACATC CAGCCTGAGT TCTCCGGCGA CCTGCTGGTC
TTTGAGCGCG ACATCCCGAA CAACGGCCCA GGCCCGCGCT CGATCCTGCT CCGGGGCTAC
GACGCCTCCG GCAACCCCTT CCAGAAGCAG ATCGCCGGCA GCACCACCAC CGTCGCCGGC
TCGGCCTGGG ACCCGACGAT CTCCCCGGAC GGACGCACCG TCGCGTTCCT GCAGAACGCC
ACCGTGAGCC CCGGCGTCAG CGTGCCGGCG ATCTTCGCGG TCGACGTCGC GCCGGACGGG
ACGGCCGGGA CGCCGAGGCA GATCACGTTC CCGCAGACCG CCGGCTTCGT CCCCCCGCAG
CACCCGGCCT TCTCCGCCGA CGGCAAGACC ATCGCCTTCA GCAGCTCCCC GGGCGCGCCG
CAGCCGGGCA CCTACACGGT CTCGGCGACC GTGGCCACGC CGGGCGTCAA CCCGCCGACG
AAGGTCGGGG ACCGCTGGGG GTCCCCCACG TACGACACCG CCTCGGTGGG CTTCGTGCAC
CGCCTGGCCG GTCGCGACCG GTTCGACACC GCCGATCAGG CCTCGCAGTC GCTGTGGCGG
AACCACGGCG ACGCGAACGA CCCGCGCGCA CAGGCGAGCG TCGCGGTCCT GAGCCGCTCG
GACCTGTTCG CCGACGCCCT GGGCGGTGCG GCGCTGGCCG CGCACAAGGG CGGCCCGCTG
CTGCTGACCT CGACCAAGCA GCTGGACGCC AGCACCGCCC GCGAGCTGAC CCGCGTCCTG
GCGCCCGGCT CGACGGTGTA CCTGCTCGGC GGGGACTCCG CGATCTCCCC GGCGGTCGAG
GCCTCGGTGC GCCACCTGGG CTTCAACGTC GACCGCATCG GCGGGCCCGA CCGCTACTCC
ACGGCGGTGC AGGTCGCCCA GACCGCGTCG CCGAACCCGC GCGACATCCT GCTGGCCACC
GGCAACAACT ACCCCGACGC GCTGTCCGCG GGCGCGGCGG CCGGCAGCGA CCCGGACGGT
GTCGTGGTCC TGACCAACGA CACCACCATG CCCGCGCCGA CCCGCGCCTA CCTGCAGCGC
TACGCCTCGC AGCTCCAGCA GCAGACCGGC AGCGTGACCG CGTGGGCGGT CGGCGGGCAG
GCGCTGGGGG CGTACGACAC GCTGCCCGGC GTGTGGTACC GCGTGGACGT GCACGGCGCG
GACCGCTACA CGACCTCCCT GAAGCTGGCG AACGAGTTCT TCGGCAGCCG CCAGGCCGCC
GTCGGCATCG CCACCGGCGT CAACTTCCCC GACGCGCTGT CCGGCGGCGC GCTGATGGGC
GCGGTCGAGG GCCCGCTGCT GCTGGTCAAC CCGAAGGTCG GGCTCAGCCC GGCGGACTCG
GCCTACCTGA GCCAGAGCCA TGACACGCTC AGCGACGCGT TCATCTTCGG CGGGTACAAC
GCCCTGTCGA AGCTGGTCGA CGCCCAGGCC GGCCCGCAGG TCGCCGGCGC CGCCGGCTGG
CTCGACGTGA ACGGCGCCGG CCAGGTCATC TCCGCTGCCG GTGCGGCGGC GGGTGCGGCG
ACCAGCGCCG CGGCGGCGGA GGCCACCGGG GTGAAGCCGG CGCACGCCAC CGACACGGCG
CACGGTGCGG TCAAGCCGCA CGGGAACGCG CAGCCTTCGC ACTAG
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| Protein sequence | MSFDHLRKPL ALAAVLSSAI AGAATMAPGA SAVNPGGVPA RSPLAVADGT NQIALTGGGM
LTAPTNVTSI AFSPKGDRYA YIAADSSVHT VNRDGSGDTL IAAATGVQRL HPTWGDDGYT
VGWSELSGVG NSSVLRVTAA DGSAVGASQP TWAPTGYTTS TNPGTAYNDI QPEFSGDLLV
FERDIPNNGP GPRSILLRGY DASGNPFQKQ IAGSTTTVAG SAWDPTISPD GRTVAFLQNA
TVSPGVSVPA IFAVDVAPDG TAGTPRQITF PQTAGFVPPQ HPAFSADGKT IAFSSSPGAP
QPGTYTVSAT VATPGVNPPT KVGDRWGSPT YDTASVGFVH RLAGRDRFDT ADQASQSLWR
NHGDANDPRA QASVAVLSRS DLFADALGGA ALAAHKGGPL LLTSTKQLDA STARELTRVL
APGSTVYLLG GDSAISPAVE ASVRHLGFNV DRIGGPDRYS TAVQVAQTAS PNPRDILLAT
GNNYPDALSA GAAAGSDPDG VVVLTNDTTM PAPTRAYLQR YASQLQQQTG SVTAWAVGGQ
ALGAYDTLPG VWYRVDVHGA DRYTTSLKLA NEFFGSRQAA VGIATGVNFP DALSGGALMG
AVEGPLLLVN PKVGLSPADS AYLSQSHDTL SDAFIFGGYN ALSKLVDAQA GPQVAGAAGW
LDVNGAGQVI SAAGAAAGAA TSAAAAEATG VKPAHATDTA HGAVKPHGNA QPSH
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