| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2085 |
|---|
| Symbol | |
|---|
| ID | 8333429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 2364916 |
|---|
| End bp | 2366592 |
|---|
| Gene Length | 1677 bp |
|---|
| Protein Length | 558 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644955234 |
|---|
| Product | putative FAD-binding dehydrogenase |
|---|
| Protein accession | YP_003112845 |
|---|
| Protein GI | 256391281 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3573] Predicted oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.376668 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGCTG ACGTGATCAT CGTCGGAGCC GGTCTGGCCG GGCTCACCGC CGCGCACGAG
CTGACCTCGC GGGGTCGCAA GGTCGCGGTG GTCGAGCAGG AGAACGCCGC GAACCTGGGC
GGGCAGGCGT GGTGGTCCTT CGGCGGGCTG TTCCTCGTCG ACTCCCCCGA ACAGCGGCGG
CTGCGGGTGA AGGACTCCTT CGACCTGGCC TGGCACGACT GGCTCGGCAG CGCGCAGTTC
GACCGGAAGG ACGACGAGGA CTCCTGGGGA CACCGCTGGG CGCGCGCCTA TGTCGAGTTC
GCGGCCGGGG AGAAGCGGTC CTGGCTCACC GGCCACGGTC TGAAGTTCCT CCCGACGGTC
GGCTGGGCCG AGCGCGGGGA CCTGCGCGCC GACGGGCACG GCAACTCCGT GCCGCGCTTC
CACGTCACCT GGGGCACCGG GACCGGCGTC GTGGACCCCT TCGTCCGGCT GGCGAAGCAG
GCCGCCTCCA CCGGGCTGCT GACGTTCCAC CACCGGCACC GCGTCGACGA GTTGGTGGTC
GCCGACGGCG CGGTCACCGG GGTGCGCGGC ACGGTGCTGG CGCACGACGA CGCGGTGCGC
GGCGCCCCCT CGAACCGCGA GGCGATCGGC GAGTTCGAGC TGACGGCGCA GGCGGTGATC
GTCACCAGCG GCGGCATCGG CGCGAACCAC GAGGTGGTCC GGCGGTTCTG GCCCGAGCGC
CTCGGCACGG CGCCCGGCTT CATGGTCACC GGCGTCCCGG CGTACGTGGA CGGCCGGATG
CTGGACATCA CCGAGCAGGC CGGCGCGCGG CTGGTCAACC GCGACCGGAT GTGGCACTAC
ACCGAGGGTC TGCGGAACTG GGACCCGGTG TGGCCCGGAC ACGGAATCAG GATTCTGCCA
GGACCGTCCT CGATGTGGTT CGACGCCCTC GGGCGCCGCC TGCCCTCGCC GTACCTGCCG
GGCTACGACA CCCTGGGAAC GCTGCGCCAC CTGCGGACCG ACCCGGACAT CGCAGGGTAC
GACCACTCGT GGTTCGTGCT CACGCAGCAG ATCGTCGAGA AGGAGTTCGC GCTGTCGGGT
TCGGAACAGA ACCCTGACAT CACCGCGAAC GACCGCAAGG CGTTCGTGCG CGAGCGGCTG
CTCGGCAAGG GCGCCCCGGC GCCGGTCGCG GCGTTCGTCG ACAAGGGCGA GGACTTCGCG
GTCGCCCGCG GCCTGGAGGA GTTGGTCGCG AAGATGAACG CGATGACCGA CACCGCCCTG
CTGGACACCG CCGCGCTGCG CGAGCAGATC GAAGCCCGCG ACCGGCAGAT CGCCAACCCC
TACAGCAAGG ACGCGCAGGT CCAGGGCATC CGCAACTCCC GCCGCTACAT CGGCGACCGC
CTCGGGCGCA CCGCGACGCC GCACCGGATC CTGGACCCGG CGGCCGGACC GCTCATCGCC
GTGAAACTCA ACATCCTGAC CCGCAAGACC CTCGGCGGCA TCCAGACCGA CCTGGACTCC
CGCGTCCTTT CCGCCGACGG CTCGCCGATC CCCGGCCTGT ATGCCGCCGG CGAGGTCGCC
GGCTTCGGCG GGGGCGGGAT GCACGGGTAC AACGCGCTGG AGGGGACGTT CCTCGGCGGC
TGCCTGTTCT CGGGGCGGAA GGCGGGACGG GCTGCGGCGG AGGCCAGCGC GAGCTAA
|
|---|
| Protein sequence | MDADVIIVGA GLAGLTAAHE LTSRGRKVAV VEQENAANLG GQAWWSFGGL FLVDSPEQRR
LRVKDSFDLA WHDWLGSAQF DRKDDEDSWG HRWARAYVEF AAGEKRSWLT GHGLKFLPTV
GWAERGDLRA DGHGNSVPRF HVTWGTGTGV VDPFVRLAKQ AASTGLLTFH HRHRVDELVV
ADGAVTGVRG TVLAHDDAVR GAPSNREAIG EFELTAQAVI VTSGGIGANH EVVRRFWPER
LGTAPGFMVT GVPAYVDGRM LDITEQAGAR LVNRDRMWHY TEGLRNWDPV WPGHGIRILP
GPSSMWFDAL GRRLPSPYLP GYDTLGTLRH LRTDPDIAGY DHSWFVLTQQ IVEKEFALSG
SEQNPDITAN DRKAFVRERL LGKGAPAPVA AFVDKGEDFA VARGLEELVA KMNAMTDTAL
LDTAALREQI EARDRQIANP YSKDAQVQGI RNSRRYIGDR LGRTATPHRI LDPAAGPLIA
VKLNILTRKT LGGIQTDLDS RVLSADGSPI PGLYAAGEVA GFGGGGMHGY NALEGTFLGG
CLFSGRKAGR AAAEASAS
|
|---|
| |