Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2049 |
Symbol | |
ID | 8333393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2319092 |
End bp | 2320762 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644955199 |
Product | hypothetical protein |
Protein accession | YP_003112810 |
Protein GI | 256391246 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.383654 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCCCTG TGACGAGTTC GATCCTTGAT GATCCCCGTG TTTCGCGGCG TCGGCTGCTG ACTTCCGCCT GCGCCGCCGC GGTGGTGGGT GTGACCGGGG TCCGTCCGGC CTCGGCGACG ACGGCGGCGC CGGTCGCGAA CGGCTTGGAC TACGCCTCGG CGCCGCATCC GTCGGTGGGC GCGATGGCTG CCGCCGGCTA CGCGTTCGTG GTCCGCTACC TCAGCTACAG CCCGGAGAAG AACCTCACCG CCGACGAGGC GCGGGCGCTG ACCTCGGCGG GAATCGCAGT GGTCTGCAAC TGGGAGGCGA CCGCCGACGG TCCGCGCCAG GGCTTCGCGC GGGGCGTCGC GGACGCCACC GAGGCGGACA AGCAGGCGGC GGCGTGCGGG TCACCGGCGG ATCGGCCGAT CTACTTCAGT ATCGACTGGG ATGTCCAAGC CGCCGACATG GACGCGGTCA ACGCGTACTT CGACGGCGTC GCCTCGGTCA TCGGCGTCGC CCGCACCGGC GCCTACAGCA GCTATGACGC GCTCGGCTGG TTGCTGGCCT CGGGACGGAT CCAGTGGGCT TGGCAGTCGT GCTCGACGGC GTACTCCAAC GGCCGCAACC GCACGCCGTA TCCCGGCATC CAGCTGTGGC AGAACCGGAC GCCGTTCACG TTCGACGGCG CCGACGTGGA CGGCGACCAG GCGCTGACGG CGGACTTCGG GCAGTGGGGC GCCGGGGCGT TCATGGAGCC GCAGGGGAGC GGCGGGCGGA TCGCCGGCGG TGTGCACAGC GATGGACGGA TCGAGCTGTT CGCGGTGACG CCGAGCGGCG GGATCACGAA TGCCGCCGAG ACGGCGCCGA ACGGCGTGTG GTCGGGGTGG AGTGATTTCA GTCCGGCTAA AGGCTTCGGG TTCGCGGCGC GCACGAGTTC GGTGGCGGTC GGACGGCACG CCGACGGTCG GCTGGAGGTC TTCGCGGTGA TGAGCGACGG CTCGGTGCAG AACCGCTTTC AGGACTCGGC GGGCGGAGCG TGGTCGGATT GGGGCGTGTT CGCATCGTCG AAGACTGCGA AAGCGTTGAC GGTTGTGGCA CATGCCGACG GTCGGCTGGA GCTGTTCGCG GCGACGCCGA CCGGTGGGAT CTCGAATAAG TCCGAGACGA CGCCGAACGG CGCGTGGTCC GGGTGGAACG AGGTCGGACC GCAAGGCGGC GTCACGGAAA CCGTGAGTGC TGCCCGCCAC GCCGACGGAC GCCTGGAGGT GTTCGCGGTG ATGAGCGACG GCTCGATGCG CAACCGTGTC GAGACAGCGG CGAACGGCGC GTGGTCCGCT TGGGGCGTCT ACGGCCCAAC CGGCGGCGCG AACGGGTACG GCGCTCCCGG CACCGTGGCG GCCGGGGCGC ATCAGGACGG CCGGGTCGAG GTTTTCGCGG TCACGCCGGG CGGCGGCGTC CGGAACCGGT TCGAGGCGGT GGCGAACGGC GCCGAGTGGT CGAGGTGGGG CGACGGCTTC GGTCCCGCCG GTCCGGTCAC CGCTGCTTCG GTGACGCGGC ATGCCGACGG TCGGATGGCG GTCTTCGCCG TGCTGGCCGA CGGGTCGATC TGGAACCGGT CCGAGGCGGT GGCGAACGGC GCGTGGTCCG AGTGGAACGG GTTCGTTGGG GCTGGAATGG TAAAGCCTTG A
|
Protein sequence | MVPVTSSILD DPRVSRRRLL TSACAAAVVG VTGVRPASAT TAAPVANGLD YASAPHPSVG AMAAAGYAFV VRYLSYSPEK NLTADEARAL TSAGIAVVCN WEATADGPRQ GFARGVADAT EADKQAAACG SPADRPIYFS IDWDVQAADM DAVNAYFDGV ASVIGVARTG AYSSYDALGW LLASGRIQWA WQSCSTAYSN GRNRTPYPGI QLWQNRTPFT FDGADVDGDQ ALTADFGQWG AGAFMEPQGS GGRIAGGVHS DGRIELFAVT PSGGITNAAE TAPNGVWSGW SDFSPAKGFG FAARTSSVAV GRHADGRLEV FAVMSDGSVQ NRFQDSAGGA WSDWGVFASS KTAKALTVVA HADGRLELFA ATPTGGISNK SETTPNGAWS GWNEVGPQGG VTETVSAARH ADGRLEVFAV MSDGSMRNRV ETAANGAWSA WGVYGPTGGA NGYGAPGTVA AGAHQDGRVE VFAVTPGGGV RNRFEAVANG AEWSRWGDGF GPAGPVTAAS VTRHADGRMA VFAVLADGSI WNRSEAVANG AWSEWNGFVG AGMVKP
|
| |