Gene Caci_2036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2036 
Symbol 
ID8333380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2307115 
End bp2307756 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content68% 
IMG OID644955186 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003112797 
Protein GI256391233 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00223971 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0618137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCG AGCGGCGGCC GCTCCGCGAG CAGATCAAGG ACGTGCTCCT CGAACGCCTG 
GGGCGGGGGG AGTACGCCCC CGACCAGCCG ATCAACGAGG TGCACCTGGC TGCTGACCTG
GGCGTCAGCC GCACCCCCCT GCGCGAGGCG CTGATCGGCC TGGAACGCGA GGGCATCATC
ATCAGCGAAC GCGGCAAGGG CTTCCGCTTC GCGCCGATGA GCCCGCAGGA GTTCCGCGAC
CTGACGACGA TCATCGCCAC CCTCGAATCA CTGGCGCTGG AGCTGTCCCC GCCCGAGTAC
CTCAAGCACA TCGGCCCGCA GCTGCTTGAG GAGGCGCACG CCTTCTCCGC GCCGAAGGCC
GAGCTCGGCG TGATAGAGCG CTACGACGAC GAGTGGCACG ACCGGCTCCT CTCGGGCTGC
CGCAACGACC GGCTGATGGA CCTGATCACG ACCCTGAAGC TGACGATGCA CCGCTACGAG
CGCGTGGTCG TCGGCGACCA GCAGGTGCTT GAACGATCGG CGGTGGAGCA CGAGAAGATC
GCCGAATGCC TGGTCGCCGA GGATCTGCCG GGCGCGGTCG CGGCGCTGAA GGCGAATTGG
GAGAGCGGGA TGCATCGGAT TCTGGAGAAG TTGGGGGCGT AG
 
Protein sequence
MAIERRPLRE QIKDVLLERL GRGEYAPDQP INEVHLAADL GVSRTPLREA LIGLEREGII 
ISERGKGFRF APMSPQEFRD LTTIIATLES LALELSPPEY LKHIGPQLLE EAHAFSAPKA
ELGVIERYDD EWHDRLLSGC RNDRLMDLIT TLKLTMHRYE RVVVGDQQVL ERSAVEHEKI
AECLVAEDLP GAVAALKANW ESGMHRILEK LGA