Gene Caci_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2023 
Symbol 
ID8333367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2290215 
End bp2291234 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content72% 
IMG OID644955173 
Producttranscriptional regulator, ArsR family 
Protein accessionYP_003112784 
Protein GI256391220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.968345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0622762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGGA TCCAGCTGGG CTCAGACGGT CTGGCGCACT CGCGGTTCGC GATGTCGCCG 
GTCACCGAGA CGGTCAACCT GCTGATCGCC GCGCGGGTCG GGACACTCGC GCCGCCGCTG
CGCGCCCCGC TGCGCCAGAC GTTGGCGAAC CGGCGCCTGG ACGTGCTGTC GGCGCTGGTC
CGGGTGGATC GCGGCGCGGG GCACTACATC CCGGACTTTG TCACACCCCC GCCGCCGCGC
TTCGAGAATC AGCCCTCTGA GGAGCTGCAC GCCGTCGCGA CCACACCGAC CTGGCGGGTC
GCCGGTGAGC TGAGCCTGGC CGCCGCCGGC AACCTCGCCA ACACCGTCGG GCGCGCGCTG
CCCCGACAGC TCACCGACGC CGACGAGCAG AAGACCGCCG AGCAACTGGC GACGGAACTG
GAGCAGGTCT GGCTTCACGT CCTCGCGCCG AGGTGGTCGC GCATCAGGGC ACGAATAGAA
GCCGACATCG CCGATCGCCT GCAGACAGCC GGCAGGCACG GCTTCGCCGC GGCGATCGAC
TCCCTCGATC CGCAGATCGA CTGGCACGAC GGCGCGGTGC GCGTGCACGG ACGCTTCGAC
GTGGACGTCC GCGAGCCGGG GATCACGTTC GTACCGAGCG TGTTCGTCAC GCGCGCCGCG
ACGGTCATCG ATCCGGTTCC GCCGTGCGAC ATCCCCGGCT ACGCCGCCTA CGGTCCGGGC
AACCCGGCGC CGTGGCCGTA TCCGGAGCGC CGCGCCGCCA TGTGTGTCTA TCCGGTCGCG
CGCCGGCCGC CGGGACGCCG GCCGGAGGCG GCGCGGCCGG AGGAGCTCAT CGGCCGGACC
CGCGCCCGGA TCCTGGACGC CGTGGCGGAC CCGGCGACGA CCGGCGAGGT GGCGGGCCGA
CTGCGGCTGA GCCCGTCAAC GGTGTCGTAC CACTTGCAGA TCCTGCACCG GGCCGGGCTG
GTGCGGCGGA CTCGGGACGT TCGCAGTGTT CTGTATCAGT CCACACGTCG TGCCGGATAA
 
Protein sequence
MIRIQLGSDG LAHSRFAMSP VTETVNLLIA ARVGTLAPPL RAPLRQTLAN RRLDVLSALV 
RVDRGAGHYI PDFVTPPPPR FENQPSEELH AVATTPTWRV AGELSLAAAG NLANTVGRAL
PRQLTDADEQ KTAEQLATEL EQVWLHVLAP RWSRIRARIE ADIADRLQTA GRHGFAAAID
SLDPQIDWHD GAVRVHGRFD VDVREPGITF VPSVFVTRAA TVIDPVPPCD IPGYAAYGPG
NPAPWPYPER RAAMCVYPVA RRPPGRRPEA ARPEELIGRT RARILDAVAD PATTGEVAGR
LRLSPSTVSY HLQILHRAGL VRRTRDVRSV LYQSTRRAG