Gene Caci_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1992 
Symbol 
ID8333335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2251853 
End bp2253778 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content71% 
IMG OID644955141 
Producthypothetical protein 
Protein accessionYP_003112753 
Protein GI256391189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCTC GGCTGACACG TCGCCTACCG GCCGACGCCG ATGGGGAGTC CCATCGCGCC 
GCCCTCCAAG AGTTGGAAGC CCTCGCCGGG GAGCATCCCG AGCAGCGGCA ACCGATCGCC
GACGCCCTGT GCCGCTACCT GCGCGAGCCG GCCGCGCAGG CGCCCGCCGG GCAGCAGGCC
GTCGCACTGC TCGCAGCCCT GGCACGTCAG CATCCTGACG CTCCCCGGCT CGGTGCGGAC
GGCTCCTGCG CCTTCGACTG CGAGTACTGC CTCGATCTGA ACCTGGACGG CGCGATCCTC
CCCGACGTCG ACTTCGGCGA CTGCCGTCTC GGCGCCGTCA GCCTCACCGA CACCCACTTG
TACGGCGACT CGGTCTTCGC CGGGACGCGC TTCGCCGACC AGGCGCTGTT CCAGCGCTCG
GTCTTCGAAG GCGACGCCTC CTTCGCCGGT GCCCGCTTCC ACCGCGCGGC GGATTTCGGG
CGCGCCAGGT TCCGCGCGAA CGCCGACTTC TCCCGCGTCC GCTTCCAGAA CATCGCCTGG
TTCGGCCGCG GCGAGGAGGC GCTGGACGAG GAGGACGAGG CGTGGGAGGA GATCGAGACC
CGGCGCACCG TGGCGTGGGA GGAGCTCAAC GAGGACGATC CGAACTGGCC GATCGCCGGG
CTGACCGAGG AGTACCAGAT GTGGGAGGAG GGCGGCGACG GCACGCGCTT CAACCACGGG
GTGTCGTTCA CCGACGCCAC GTTCGCCATG GAGGCGTGGT TCTGGAAGGC GCGCTTCGGC
AGCGCGGTGT CGTTCCAGCG GTGCGTGTTC GGCGGTCGGG TCCACCTCAT CCAACCCGCG
GTGGACCTGA CCGGCGCGCG GCTGACCGCG GACGCCCAGG AAAAGGGACA GGAGTGGCCC
GAAGGACAGG ACTGGCCGCT GGGCTGGACG ACGGTCGCAG ACCTCGATGA CGGCGGCGAC
GCGCTGGTCG TCCTGGACAC CTCCCTGTCG CCGTACCACC TGCACCTCGC CGATCCCGAT
CCGGAAGTCC GGCTGGCCGG TCTGCGGATC CTCGGCGAAC TCGGAGACGC GGAGCCCGAT
CTCAGGGAAC GGATAGCCGA CACCGTGTGC GCGTATCTGC GCACCCCCCT GTCGTTCGAC
GTGACCACGA ACGTCTTCGA TCTCGCGCCC TCGCAGTTCG CTGAGTTACG CACGCGCCGC
GCCGCTCAAC GACTCCTCAC CGACCGGACC CGCCAGCGTC CCGGGCAACC GCTCTGGGAG
GACATCGACC TCCAGCTCTC CGGCGCCACG TTGATCGACT TCGACGCCGC CGGCTGTCGC
CTGGCCCGCG CAGACTTCAG CGGCGCGCAG TTCTACGGGA CGACGTCCTT CGCGAACGCG
ACATTCGGCA CCAAGCAGTC CGCCGCCGGC TCGGAGATCA GCTTCGCACT GACCTCGGGC
GGTCAGCAGG GACGCGCCAG CTTCCACGGT GCGGCCGACT TCTCAGGACT CGATGTCCGC
TCCTCGGGTC TCATGCGCTG CCGCTTCCAC GCAGACAGCG CAGTCCGCGG CTCGGGCACC
GACCAGGACC TGATCAGGGT TCTGCTGGGT GCCCGGCTCG CCGGCGACGC GGCGGAGGCG
ACCGCCGACT TCCTCGAGGC GTTGCGCGCG TTCAGCGCGA GCGCGCCGTA CACACTGAGC
CGGGAAGCCT GCGAAAACCT CATCCAGACC GTGGAATACG GAACGGTCCC GGGTCCGCCG
GACGCCCCGT GGGAAAGCCG CACGGGGCTG AAGCTCGTCG GCACCGACGT GCTTCTCGCC
GACCTCGCGG GCCCTATAAG CCCCGCCGCG CCCGACGCCG ACCGCCTCCT GCTGCTCGGA
CCCGGGCAGC GGGAGGCGGC GGCCGACGTC ATCAGGGTCC TGCTGACGGC ACTGGAGGCC
GACTAG
 
Protein sequence
MDARLTRRLP ADADGESHRA ALQELEALAG EHPEQRQPIA DALCRYLREP AAQAPAGQQA 
VALLAALARQ HPDAPRLGAD GSCAFDCEYC LDLNLDGAIL PDVDFGDCRL GAVSLTDTHL
YGDSVFAGTR FADQALFQRS VFEGDASFAG ARFHRAADFG RARFRANADF SRVRFQNIAW
FGRGEEALDE EDEAWEEIET RRTVAWEELN EDDPNWPIAG LTEEYQMWEE GGDGTRFNHG
VSFTDATFAM EAWFWKARFG SAVSFQRCVF GGRVHLIQPA VDLTGARLTA DAQEKGQEWP
EGQDWPLGWT TVADLDDGGD ALVVLDTSLS PYHLHLADPD PEVRLAGLRI LGELGDAEPD
LRERIADTVC AYLRTPLSFD VTTNVFDLAP SQFAELRTRR AAQRLLTDRT RQRPGQPLWE
DIDLQLSGAT LIDFDAAGCR LARADFSGAQ FYGTTSFANA TFGTKQSAAG SEISFALTSG
GQQGRASFHG AADFSGLDVR SSGLMRCRFH ADSAVRGSGT DQDLIRVLLG ARLAGDAAEA
TADFLEALRA FSASAPYTLS REACENLIQT VEYGTVPGPP DAPWESRTGL KLVGTDVLLA
DLAGPISPAA PDADRLLLLG PGQREAAADV IRVLLTALEA D