Gene Caci_1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1987 
Symbol 
ID8333330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2246258 
End bp2247982 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content70% 
IMG OID644955136 
Productserine/threonine protein kinase 
Protein accessionYP_003112748 
Protein GI256391184 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.925878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.658118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCTG ACGTCGCCGA ACCGCTCGGT CCGGGCGACC CGCGCGAGAT CGGCCAGTTC 
ACCGTCATCG GCGTCCTCGG CGCCGGCGGC ATGGGAGAGG TCTATCTCGG CACCCGCGAA
GGACGCTACG TCGCGGTCAA GCGGGTCAAG CCGCGCCTGG TCTCCGGAGA GCGGTTCAAC
CGCGAGGTCG CGATCCTGCA CCGCGTTCCC TTCGGGGTCG CCCCCTCTCT GCTGGCCAGC
GACAGCACCG CGCCCGAGCC GTGGTTCGCG ACCGAATACG TACCCGGACT CACTGTGGAG
GATGCGGTCC GCTCCTTCGG ACCGCTCGCC GCCGACGCCC TGTGGCTGCT GCTGGCCGAG
ACCGCCGCGC ACTTACAGGC CGTGCACGAG GCCGGGATCG TGCACCGCGA CCTCAAGCCC
GCCAACATCA TGCTGGTCCG CGACGGCGTG AAGCTCATCG ACTTCGGCAT CGCGCTCGCC
GGCGACCAGG CCCGGCTGAC GCGCACCGGC GCGAGTTCGG GCACGCGCGG GTTCACCGCG
CCGGAGCAGG AAGCCGGCGA CCGGGACGTC AGCGAGCGGG CCGACCTGTA TTCGCTGGCC
GCCACACTGA TCTACGCCGC CTCGGCACGT CTTCCCGGCG CGCTGCCTGA CATCAGCACG
ATCCGCACGC TGGACCCCGC ACTCGCGGCG GTCGTCGAAC CCTGTCTTGC CGCCGATCCC
GCGGCTCGTC CGACGGCTGC GGAGCTGGTG ACGGCGGCAC ACGACCACGC CGACGCGGTG
AGTCCGTCGT GGTCGGCGCC GGTGATGGAG CGCATCGCGA AGCGGCGGGC TTTCGCCGCG
ACGCCGGTCA GCGTGATCGA CACGGTGCTG CCGCCTGACC TGGAGGTAGC AACAGAGCCG
GAACCCGGTC CCACGCAAGG GCTGACCGAC AACGGCGAGG CTGGACGGTC GCGCCGAACG
CGAGTCCTCA TACCGCTGGC AGCGGTCGCA GTGTTCTGTG TCGCGGTCGC CGGGGTGCTC
GCAGCGCTCT CGTCGCATGG GAACTCCTCG ACGCATTCGC CTTCTGCCGC CTCGGGAATC
GGCATCGTGC CGATCGCCGG GACCGAATCG TCCTCGGCTC CGCCGCGTTC GTCTCAGACG
ACCGCCCCGG GACCGACCTC GTCCGGATCC TCCTTGACCG GGTCCTCCTC GACCGGGTCC
TCCTCGACCG GCCTCGGAAG CACGACGCCG ACGGGCACCA AGACCTCGTC GTCGAAGAAC
GGCAGCGGAG CCAGCACGCC GAGCCGACCC GCCGGTACCA CCGCACCGAG TACTCATCCC
AGCTCGACGA AGAGTCAGGG GCCTGGCAAG TCCGATCCCA CCCCGACCGC CTCGTCGATC
CCAGGCATCA ACAGCGCCGA CGATCCGGCG CGCGTCCCGA ACTCCGAGGC GGACACCACC
TGGGTGGCCA ACGACGCGGC GTGCTCGGGC TGGCTGGACA GCGACGGTTC GGGCAACCTC
GCCGGAGTGC TCAACACCTC GCTGCAGCAG TCGTGCGTCG CCGAGGTGAT CCGCAGCGAC
GGAATGACCT ACACCTTCAG CGCATCCCAC TTCGCCGAGA AGACGAACTT CTTGCCCGAC
CAGGGCTACA CGATGCAGAT CTGCGTCTGG CACGCGGACG AGAAGGACAG TCAGTCGTGC
TCACCGCAGT TCGGCATGAG CGGCACGAGC CCGGTTCAGA AGTAG
 
Protein sequence
MDADVAEPLG PGDPREIGQF TVIGVLGAGG MGEVYLGTRE GRYVAVKRVK PRLVSGERFN 
REVAILHRVP FGVAPSLLAS DSTAPEPWFA TEYVPGLTVE DAVRSFGPLA ADALWLLLAE
TAAHLQAVHE AGIVHRDLKP ANIMLVRDGV KLIDFGIALA GDQARLTRTG ASSGTRGFTA
PEQEAGDRDV SERADLYSLA ATLIYAASAR LPGALPDIST IRTLDPALAA VVEPCLAADP
AARPTAAELV TAAHDHADAV SPSWSAPVME RIAKRRAFAA TPVSVIDTVL PPDLEVATEP
EPGPTQGLTD NGEAGRSRRT RVLIPLAAVA VFCVAVAGVL AALSSHGNSS THSPSAASGI
GIVPIAGTES SSAPPRSSQT TAPGPTSSGS SLTGSSSTGS SSTGLGSTTP TGTKTSSSKN
GSGASTPSRP AGTTAPSTHP SSTKSQGPGK SDPTPTASSI PGINSADDPA RVPNSEADTT
WVANDAACSG WLDSDGSGNL AGVLNTSLQQ SCVAEVIRSD GMTYTFSASH FAEKTNFLPD
QGYTMQICVW HADEKDSQSC SPQFGMSGTS PVQK