Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1972 |
Symbol | |
ID | 8333315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2230369 |
End bp | 2230848 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644955121 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003112733 |
Protein GI | 256391169 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.276082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.475947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCA GCCACGACCT GCGTTTCGAC CACGGAGACG AGACTCCCCC GCAGCTCAAG AAGCAGTTCT CGCGGCTGAT CGGGATGACG GCCGTGCAGA CCGGCCGCGT CGCATCCGAA GCCCTGCGCG CGGTCGGCGC CCACAAGGAC CACTTCGTCG TCCTGGCCGC CCTCACCGAG TTCGGCCCGG CAAGCCAAGC CGACCTGTCC CGACGCACCC GCATCTTCAA GAGCGACCTG GTCGCAGTCC TCAACGACCT CGAAGCCCAC CACCTCGTCC GCCGCACCCC CGACCCCGCC GACAAACGCC GCAACGTCAT CACCGTCACC CCCGCCGGCC ACCGCCGCCT CACCGAACTC ACCACTCTCC TCGACGCCGT CAACGACCAG GTCCTGGCAC CCCTGTCGGC AGCCGAACGC ACGCAGCTGT TCGCTCTCCT CGGGCGCGTC AACGCCCACC TCGCCGAGCC GGACGAGTAG
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Protein sequence | MDTSHDLRFD HGDETPPQLK KQFSRLIGMT AVQTGRVASE ALRAVGAHKD HFVVLAALTE FGPASQADLS RRTRIFKSDL VAVLNDLEAH HLVRRTPDPA DKRRNVITVT PAGHRRLTEL TTLLDAVNDQ VLAPLSAAER TQLFALLGRV NAHLAEPDE
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