Gene Caci_1972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1972 
Symbol 
ID8333315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2230369 
End bp2230848 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content69% 
IMG OID644955121 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003112733 
Protein GI256391169 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.276082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.475947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCA GCCACGACCT GCGTTTCGAC CACGGAGACG AGACTCCCCC GCAGCTCAAG 
AAGCAGTTCT CGCGGCTGAT CGGGATGACG GCCGTGCAGA CCGGCCGCGT CGCATCCGAA
GCCCTGCGCG CGGTCGGCGC CCACAAGGAC CACTTCGTCG TCCTGGCCGC CCTCACCGAG
TTCGGCCCGG CAAGCCAAGC CGACCTGTCC CGACGCACCC GCATCTTCAA GAGCGACCTG
GTCGCAGTCC TCAACGACCT CGAAGCCCAC CACCTCGTCC GCCGCACCCC CGACCCCGCC
GACAAACGCC GCAACGTCAT CACCGTCACC CCCGCCGGCC ACCGCCGCCT CACCGAACTC
ACCACTCTCC TCGACGCCGT CAACGACCAG GTCCTGGCAC CCCTGTCGGC AGCCGAACGC
ACGCAGCTGT TCGCTCTCCT CGGGCGCGTC AACGCCCACC TCGCCGAGCC GGACGAGTAG
 
Protein sequence
MDTSHDLRFD HGDETPPQLK KQFSRLIGMT AVQTGRVASE ALRAVGAHKD HFVVLAALTE 
FGPASQADLS RRTRIFKSDL VAVLNDLEAH HLVRRTPDPA DKRRNVITVT PAGHRRLTEL
TTLLDAVNDQ VLAPLSAAER TQLFALLGRV NAHLAEPDE