Gene Caci_1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1968 
Symbol 
ID8333311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2225362 
End bp2226510 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content68% 
IMG OID644955117 
Productpeptidase M48 Ste24p 
Protein accessionYP_003112729 
Protein GI256391165 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.469545 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCCG CGCTGATTCT GGGGTCCTAC GCGCTGCTGT TGGCGGTGGT TGGGCCGGGG 
GTGGTGGCTC GGGTTTGGCC TTCGGGGCGG ATGCCTCGGG TGACTGTTGT GGTGCTGCAG
GTGGTGAGTT GTTCTTTTTT GACCGCGGCG GCTACGGCGG GGTTGGCGTT GGGGTTGACG
TTGATCGATA CGTTGTCGCG GATGGATCCG CAGATTGATC GGTGTGCTGA TCAGCTGCCC
ATTAACGACG ATTCGCCGGT CGGGCCGTTT TTGGGGTGGT TCGGGCTGGT GGCGGGCGCT
GCTCTTGTGG TGCGGGTCGG GTTCTGTCTG GCTGCGACCT TCTTGTCTGC TTGGTGGACT
CGGCGGAAGC ACATCGCGAT CCTGCGGATT TGCGCGCGTG CCGACCAGGA GCTCGGGGTT
CTGGTGCTGG AGCATGATGA GCCCGGGTGT TATTGCCTGC CGGGGCGGCC GGGGACGATC
GTCATCACCA GCAGTGCCCT GACGCGGTTG TCGCCGGCGC AGCTTGGTGC GGTGTTGGCG
CATGAGCGGG CGCACTTGAC CGGGCGGCAT CACTTCGCCG TGGCGTTCGC GCACGCGATC
CATCGCACGG CGCCGCGGAT TCGGTTGCTG GGGTTGGTCG AGCAGGAGAC GCGGCGGTTG
GTGGAGTTCA TCGCCGATGA TGCGGCGGTG CGGCGGAGTG GGACGGTGGC GCTGGTTTCG
GCGCTGGCGG TGCTGGGTGC GGGGAGTACG GCGCCGGGGA GTGCGCCCGG GTTCGCGCTC
GGTGTCGGGA TGGATCGGCG GCCGGCGGCG TCCTCGCGAG TGACGCGGCT CGCGCACGGG
CAGAACGGGC GGCGGGGTCT GGCGATGGGC GCGATCGGTT CCGCGCTGCT GATCATCGTG
CCGTTGGTGC TCGCCGCGTT GTCCGTGGCG ACGGTGATCC ACGGGTGTCC GCCGGACAAG
GACGGGGACG CGGATGCCTT GGCGCTGCCG CCATCGGTGA GGCTGGTGGG GGCGGCCGGA
GCGGCGGAAT CGGTCGGAGC AGTCGGGTCA GCGGGGTCGG TCGGGTCGGC AGGATCGGTC
GGATCGGTCG CATCGGTCTT TCCCGGGACC TCTTGGGATG CGGCGTTTGG CAATTCAGCG
GCCGGGTAA
 
Protein sequence
MIAALILGSY ALLLAVVGPG VVARVWPSGR MPRVTVVVLQ VVSCSFLTAA ATAGLALGLT 
LIDTLSRMDP QIDRCADQLP INDDSPVGPF LGWFGLVAGA ALVVRVGFCL AATFLSAWWT
RRKHIAILRI CARADQELGV LVLEHDEPGC YCLPGRPGTI VITSSALTRL SPAQLGAVLA
HERAHLTGRH HFAVAFAHAI HRTAPRIRLL GLVEQETRRL VEFIADDAAV RRSGTVALVS
ALAVLGAGST APGSAPGFAL GVGMDRRPAA SSRVTRLAHG QNGRRGLAMG AIGSALLIIV
PLVLAALSVA TVIHGCPPDK DGDADALALP PSVRLVGAAG AAESVGAVGS AGSVGSAGSV
GSVASVFPGT SWDAAFGNSA AG