Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1894 |
Symbol | |
ID | 8333237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2149841 |
End bp | 2150545 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644955043 |
Product | ABC transporter membrane protein |
Protein accession | YP_003112655 |
Protein GI | 256391091 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGCCA TAGCCATCGC CGAGACGAAG ATGCTCCTGC GCAACCGGCT CGTCGCCGGC TGCGCCCTCC TGCTCCCCCT CGCCTTCGGA CTGTTCCTCT TCGTGGGCAG GGACACAGAA AAGGCCGGAG GCGCCCTCGC CGGCGTGCAA TGCGTGATGA TGGCCGCGAT GGGCACCTAC GTGACCGCCA CGACGACCCT CGCCGCCCGC CGCCAGACCC TCTACCTGAA GCGGATGCGC GGCGCGGCGA TCTCCGACCG AAGCATCATC ACAGGACTCT TGCTTCCCGT CGTCACGGTG AACATCGTCC AGGTCGCAGT GGTCTACGGC ATCCTGGCGT CCAAAAACGC CCCCGCCAAC CCCCTCCTCC TGATCGCGGC CGTACTCCTC GCCGAGACCA TGTTCACCGG ACTGGCCCTG GCCACCGCCG GCTTCTCGAA CTCCCCCGAA CACGCCCAAT ACATGACGGC GCCGATCTTC CTCGTGGCCA CCGCCGCCGC AGTATGGTTC CAGGCACCCA CCCTCGGCGG ACCGATCGCC GTCAAGCGAG CCCTGCCCGG CGGCGCGATC GCGGAGCTGA TCTCCATAGC CTGGAACGGC GGAAGCCTGT CGTCAGTCCC CATCCTGCTC GCGGCATGTC TGGCGTGGGC GATCGCCGGG GCGTGGGCCG CGCGCGCTTG CTTCCGGTGG GAGCCGCGTA ACTAG
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Protein sequence | MNAIAIAETK MLLRNRLVAG CALLLPLAFG LFLFVGRDTE KAGGALAGVQ CVMMAAMGTY VTATTTLAAR RQTLYLKRMR GAAISDRSII TGLLLPVVTV NIVQVAVVYG ILASKNAPAN PLLLIAAVLL AETMFTGLAL ATAGFSNSPE HAQYMTAPIF LVATAAAVWF QAPTLGGPIA VKRALPGGAI AELISIAWNG GSLSSVPILL AACLAWAIAG AWAARACFRW EPRN
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