Gene Caci_1894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1894 
Symbol 
ID8333237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2149841 
End bp2150545 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content68% 
IMG OID644955043 
ProductABC transporter membrane protein 
Protein accessionYP_003112655 
Protein GI256391091 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCCA TAGCCATCGC CGAGACGAAG ATGCTCCTGC GCAACCGGCT CGTCGCCGGC 
TGCGCCCTCC TGCTCCCCCT CGCCTTCGGA CTGTTCCTCT TCGTGGGCAG GGACACAGAA
AAGGCCGGAG GCGCCCTCGC CGGCGTGCAA TGCGTGATGA TGGCCGCGAT GGGCACCTAC
GTGACCGCCA CGACGACCCT CGCCGCCCGC CGCCAGACCC TCTACCTGAA GCGGATGCGC
GGCGCGGCGA TCTCCGACCG AAGCATCATC ACAGGACTCT TGCTTCCCGT CGTCACGGTG
AACATCGTCC AGGTCGCAGT GGTCTACGGC ATCCTGGCGT CCAAAAACGC CCCCGCCAAC
CCCCTCCTCC TGATCGCGGC CGTACTCCTC GCCGAGACCA TGTTCACCGG ACTGGCCCTG
GCCACCGCCG GCTTCTCGAA CTCCCCCGAA CACGCCCAAT ACATGACGGC GCCGATCTTC
CTCGTGGCCA CCGCCGCCGC AGTATGGTTC CAGGCACCCA CCCTCGGCGG ACCGATCGCC
GTCAAGCGAG CCCTGCCCGG CGGCGCGATC GCGGAGCTGA TCTCCATAGC CTGGAACGGC
GGAAGCCTGT CGTCAGTCCC CATCCTGCTC GCGGCATGTC TGGCGTGGGC GATCGCCGGG
GCGTGGGCCG CGCGCGCTTG CTTCCGGTGG GAGCCGCGTA ACTAG
 
Protein sequence
MNAIAIAETK MLLRNRLVAG CALLLPLAFG LFLFVGRDTE KAGGALAGVQ CVMMAAMGTY 
VTATTTLAAR RQTLYLKRMR GAAISDRSII TGLLLPVVTV NIVQVAVVYG ILASKNAPAN
PLLLIAAVLL AETMFTGLAL ATAGFSNSPE HAQYMTAPIF LVATAAAVWF QAPTLGGPIA
VKRALPGGAI AELISIAWNG GSLSSVPILL AACLAWAIAG AWAARACFRW EPRN