Gene Caci_1866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1866 
Symbol 
ID8333209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2112658 
End bp2113701 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content67% 
IMG OID644955015 
ProductAuxin Efflux Carrier 
Protein accessionYP_003112627 
Protein GI256391063 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCAGCG CCTTCATACC GATCTGGCTC CTCACCGGCC TCGGTTACCT CGCCGCCCGC 
TTCAACCTCG TCGGGGCGGT GTCGGCGGAC GTGGAGGCGG TGCTGGGGCG GTTCGTGTTC
CGGGTGGCGA TGCCGGCGTC GTTGTTCGGC ATGCTGGCGC GGTCCGATCT GCACGCGCTG
GCGAACACCT CGATCGTGGC GTTCGGGGTC AGCTCGCTCG CAGCGTGCGG GCTCGGGCTG
GTGATCAGCA CGCGGGTGTT CGGGCGCGAC GTCTCGAACG GCGCGGTGGT CGCGATGGCC
TCCGGGTACG TCAACTCCGC GAATCTGGGC ATCCCGGTGG CGATCCAGGT GCTGGGCAAC
GCGGCGTTCC TGTCGACCGT GATCCTGTTC AACACCGTGC TCGTGACGCC GATCCTGATG
ACGCTCATGG GCTTGGGCGA CGGGCCTTCG CCGGGGATAC GGCATCGGCT GCGGGGCATA
GCCCTGCTGC CGGTCCATAA TCCGATCATC ATCGCGTCCG CGTTCGGGGC GCTGGTGTCA
GGGACCCACT TCCACGTTCC GGCGGACGTG AGCAGTGCGC TCACTCTGCT TGGCGGAGCC
GCGGTACCGG TCGCGCTGAT CACGCTCGGC ATGTCGCTCT ACGGCGGCAG CGGCAAGGGC
ACTGCCAAGG ACGGAAGCAG AGACGCCAGC AGGCACACCA GCAACGACGC GTACACCAGC
GCCGAAAACA GCTCCATAGC CAGCGAAAAC CTCAACCCCG AGCAACGCAT CGAGAAATCC
CGCATCGCCG AAGCCGCGAT AGCCCTGACC CTCAAGATCG CCCTCCAGCC GGTCCTCGCC
TACCTCCTCG CGCGCTACGC CCTCGACCTC TCCGGCCGAG ACGTCCTCGC CGTCACGCTC
TGCGCCGCCC TCCCCACCGC CCAGAACGTG TTCATCTACG CGAGCGAATA CGCCCTCGAC
ACCGTCTTCG CCCGCAATGC CGTGATCTTC TCGACCGTCA CCTCCATGGC GGGGCTCTGG
ACGGTCGTCG CGCTCCTGAA GTGA
 
Protein sequence
MLSAFIPIWL LTGLGYLAAR FNLVGAVSAD VEAVLGRFVF RVAMPASLFG MLARSDLHAL 
ANTSIVAFGV SSLAACGLGL VISTRVFGRD VSNGAVVAMA SGYVNSANLG IPVAIQVLGN
AAFLSTVILF NTVLVTPILM TLMGLGDGPS PGIRHRLRGI ALLPVHNPII IASAFGALVS
GTHFHVPADV SSALTLLGGA AVPVALITLG MSLYGGSGKG TAKDGSRDAS RHTSNDAYTS
AENSSIASEN LNPEQRIEKS RIAEAAIALT LKIALQPVLA YLLARYALDL SGRDVLAVTL
CAALPTAQNV FIYASEYALD TVFARNAVIF STVTSMAGLW TVVALLK