Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1866 |
Symbol | |
ID | 8333209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2112658 |
End bp | 2113701 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644955015 |
Product | Auxin Efflux Carrier |
Protein accession | YP_003112627 |
Protein GI | 256391063 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCAGCG CCTTCATACC GATCTGGCTC CTCACCGGCC TCGGTTACCT CGCCGCCCGC TTCAACCTCG TCGGGGCGGT GTCGGCGGAC GTGGAGGCGG TGCTGGGGCG GTTCGTGTTC CGGGTGGCGA TGCCGGCGTC GTTGTTCGGC ATGCTGGCGC GGTCCGATCT GCACGCGCTG GCGAACACCT CGATCGTGGC GTTCGGGGTC AGCTCGCTCG CAGCGTGCGG GCTCGGGCTG GTGATCAGCA CGCGGGTGTT CGGGCGCGAC GTCTCGAACG GCGCGGTGGT CGCGATGGCC TCCGGGTACG TCAACTCCGC GAATCTGGGC ATCCCGGTGG CGATCCAGGT GCTGGGCAAC GCGGCGTTCC TGTCGACCGT GATCCTGTTC AACACCGTGC TCGTGACGCC GATCCTGATG ACGCTCATGG GCTTGGGCGA CGGGCCTTCG CCGGGGATAC GGCATCGGCT GCGGGGCATA GCCCTGCTGC CGGTCCATAA TCCGATCATC ATCGCGTCCG CGTTCGGGGC GCTGGTGTCA GGGACCCACT TCCACGTTCC GGCGGACGTG AGCAGTGCGC TCACTCTGCT TGGCGGAGCC GCGGTACCGG TCGCGCTGAT CACGCTCGGC ATGTCGCTCT ACGGCGGCAG CGGCAAGGGC ACTGCCAAGG ACGGAAGCAG AGACGCCAGC AGGCACACCA GCAACGACGC GTACACCAGC GCCGAAAACA GCTCCATAGC CAGCGAAAAC CTCAACCCCG AGCAACGCAT CGAGAAATCC CGCATCGCCG AAGCCGCGAT AGCCCTGACC CTCAAGATCG CCCTCCAGCC GGTCCTCGCC TACCTCCTCG CGCGCTACGC CCTCGACCTC TCCGGCCGAG ACGTCCTCGC CGTCACGCTC TGCGCCGCCC TCCCCACCGC CCAGAACGTG TTCATCTACG CGAGCGAATA CGCCCTCGAC ACCGTCTTCG CCCGCAATGC CGTGATCTTC TCGACCGTCA CCTCCATGGC GGGGCTCTGG ACGGTCGTCG CGCTCCTGAA GTGA
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Protein sequence | MLSAFIPIWL LTGLGYLAAR FNLVGAVSAD VEAVLGRFVF RVAMPASLFG MLARSDLHAL ANTSIVAFGV SSLAACGLGL VISTRVFGRD VSNGAVVAMA SGYVNSANLG IPVAIQVLGN AAFLSTVILF NTVLVTPILM TLMGLGDGPS PGIRHRLRGI ALLPVHNPII IASAFGALVS GTHFHVPADV SSALTLLGGA AVPVALITLG MSLYGGSGKG TAKDGSRDAS RHTSNDAYTS AENSSIASEN LNPEQRIEKS RIAEAAIALT LKIALQPVLA YLLARYALDL SGRDVLAVTL CAALPTAQNV FIYASEYALD TVFARNAVIF STVTSMAGLW TVVALLK
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