Gene Caci_1837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1837 
Symbol 
ID8333180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2083935 
End bp2084834 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content69% 
IMG OID644954987 
Productbeta-lactamase domain protein 
Protein accessionYP_003112599 
Protein GI256391035 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCAGCC CGCTGGACCT GCACTGGAAC CACGGAGTAC GCCGCTGGAG TTCGGCAACG 
GAGCCACCGA TCCAGGTGCA CGCCTACGAC GAACGCACGG TGATCCTCCG CCAGAGCAAG
AGCACGAACT ACGAGGCGCC GTTCATCTAC CTGCTGTTCG GCGCCGACCG CGCACTCCTG
CTCGACACCG GCGCCACCGC GGACCCGGCG GTCTTCCCCC TGCGCGCGAC GGTCGACGAA
CTGATCACAA ACTGGCTCCA GCAGCATCCG CGCGACGGCT ACGAACTGGT CGTCGCGCAC
ACGCACAGCC ACGGCGACCA CGTCGCGGCG GACGCGCAGT TCACCGGACG CCCGGACACA
CTGGTGGTCG CGAAGGAACC AGAAGCGGTC CGCCACTTCT TCGGCTTCGA CGACACACGC
TGGCCCGACC AGGAAGTCGA GGTCGACCTC GGCGACCGCG TCCTCCGCGC GCTCGGCGCC
CCAGGCCACC ACGCCGCGGG AGTGGTATTC CACGACCCCG CAACCGGCTT CCTCCTCACC
GGCGACACCG TGTACCCGGG CCGCATCTAC GTCGCGGACT ACGCGCAACT CGTCGCCACC
CTCAACCGCC TGGTGGCCTT CTGCGCCGCC CACAAGGTGA CCTGGGTGAT GGGCTGCCAC
GTCGAGATGA CCGACCGCCC CTACCGCGAT TACCCCATCG GCTCCACGTA TCAGCCACGC
GAGCGCGCGC TACCGATGAC AGTGGCGCAG CTGACCGCTC TGCGAGACGC GGCGGTGCAG
GTCGACGGCC GTCGCGGGGA GCACAGGTTC GAGGACTTCA TCGTGTTCCA CGAGCCCGCG
GGGTGGGCAG CGATCCTGTT CCGGATGCGC GGATTCCGGG CTCGAATGCT CGGGCGTTAG
 
Protein sequence
MASPLDLHWN HGVRRWSSAT EPPIQVHAYD ERTVILRQSK STNYEAPFIY LLFGADRALL 
LDTGATADPA VFPLRATVDE LITNWLQQHP RDGYELVVAH THSHGDHVAA DAQFTGRPDT
LVVAKEPEAV RHFFGFDDTR WPDQEVEVDL GDRVLRALGA PGHHAAGVVF HDPATGFLLT
GDTVYPGRIY VADYAQLVAT LNRLVAFCAA HKVTWVMGCH VEMTDRPYRD YPIGSTYQPR
ERALPMTVAQ LTALRDAAVQ VDGRRGEHRF EDFIVFHEPA GWAAILFRMR GFRARMLGR