Gene Caci_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1825 
Symbol 
ID8333168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2070832 
End bp2071191 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content68% 
IMG OID644954975 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003112587 
Protein GI256391023 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACC CCGCCTGCCC CTCAACCGAG TCGCCGTTCC GCATAGCCGA CAAATGGGGC 
GGCATGATCG TCCTCTGCCT CGAAGCAGGA CCCCGCCGCT TCACCGAACT CCGCACACCC
CTCCCCCGCC TAGCCCCCAA GGTCCTCACC GAAACCCTCC GCTCCATGGA ACGCAACGGC
CTGATCACCC GCACCGTCTT CGACGAGAAC CCACCCCACG TCGAGTACGC ACTCACCCCC
CTCGGCCGCA GCCTGCTACC GGCGATCGCC GCCTGCCGCG AGTGGGCCTT CGCGAACCTG
GAGACAATGC GCGCTGCTCG GGATCAGTAC GACGGGGTCG GGGGCAGCGA AGCTGCGTGA
 
Protein sequence
MFDPACPSTE SPFRIADKWG GMIVLCLEAG PRRFTELRTP LPRLAPKVLT ETLRSMERNG 
LITRTVFDEN PPHVEYALTP LGRSLLPAIA ACREWAFANL ETMRAARDQY DGVGGSEAA