| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1822 |
|---|
| Symbol | |
|---|
| ID | 8333165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 2067485 |
|---|
| End bp | 2068159 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644954972 |
|---|
| Product | putative transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003112584 |
|---|
| Protein GI | 256391020 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAGG AGATCAAACG AGTCGCGCTG GTCCACCTGG CCCGCGACGG CTCGGCGCTG
TCGCTGCGCG CGGTCGCCCG GGACATGGGC ATGGTTTCCT CGGCGATCTA CCGGTACTTC
CCGAGTCGCG ACGAGCTGCT GACCGCACTG ATCATCGACG CGTACAACGA CCTCAGCGGG
GTCGTCGAGC AGGCGGACGG CGGCGTGGAC CGCCGCGACG CGTACCTGGC GCGCTGGTTC
GCGGTCTGCC ATGCCGTCCG GCGCTGGGCC ATCGCCAAGC CGGCGGAGTA CGCGCTCATC
TACGGCAGCC CGATTCCCGG CTACCTGGCG CCCGACGACA CCGTCGAACC GGGGTCGCGG
ACCGTCGTCA TCATGGCGCG GTGCATCGCG GAAGCCGAAG CGGCGGGCAA GCTCCACACC
GCTGAAGGAG TCGCGGCGCT TCCCGCGACG GAGAACTCCG TCTATGCCGA GGAACTCCGC
GCCGTCGCGG CCGGCATCGG GTTCGCCGAG GATTCGCGGG CCGTCGAGGC GGCCGTGAGC
GCCATCACGC ACGTCTTCGG CGCGGTCAAT TTCGAGGTGT TCGGACGGCT CAACCGGGTC
TTCACCGAGC GGGGCGAGTG GTTCGACCGG CAGGTGCGGG AGATGGCGGT GGGGATGGGG
CTCGCACGGC ACTGA
|
|---|
| Protein sequence | MLEEIKRVAL VHLARDGSAL SLRAVARDMG MVSSAIYRYF PSRDELLTAL IIDAYNDLSG
VVEQADGGVD RRDAYLARWF AVCHAVRRWA IAKPAEYALI YGSPIPGYLA PDDTVEPGSR
TVVIMARCIA EAEAAGKLHT AEGVAALPAT ENSVYAEELR AVAAGIGFAE DSRAVEAAVS
AITHVFGAVN FEVFGRLNRV FTERGEWFDR QVREMAVGMG LARH
|
|---|
| |