| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1796 |
|---|
| Symbol | |
|---|
| ID | 8333139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 2035130 |
|---|
| End bp | 2035975 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644954946 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003112558 |
|---|
| Protein GI | 256390994 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.994195 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCACTGGA TGATGCCCTA TCAGATGGCC TTCTGGCTGT GCGGCGTCCT CATGGTGCTG
GCCGCGGCGA TGTACTTCTC GCGCAAGCCG CTGCTCGTGA AGTACCTGCC CTTCCCGCGC
GAGCTGGGGA CCGTGCTGGG CCTGTTCGGG CTGTGGCAGG TCGCCGGGCG GCTGTCGGTG
ATGAAGGTGA ACGGCGCCCT GACCCGCGGG ACCTGGATCT GGGACACCGA GCGCGACGTG
TTCCTGCCCA GCGAGCACTG GATCCAGCAC CTGTTCTTCC CGGCGCACCC GACCGTGGTG
AAGTTCTTCA ACCTCTACTA CGCCTCGATG CACTTCACCT GCATGATCAT TTTCTTGATC
TGGCTGTTCA TCCGGCACCG CGAGCACTAC GCGAGCGCCC GCACCACGAT GGCCCTGGCC
ACCGCCTTCG CCCTGGCGAT CCAGCTGATC CCGGTGGCGC CGCCGCGCAT GATCGTCAAG
GCCCACCTGG TCGACACCGC GCTGTACTTC CACCAGTCGG TCTACGGCCC GATGAACGCG
GACTCCCCCG ACCAGCTCTC GGCGATGCCC TCGGTCCACG TGATCTGGGC GGTCCTGGTC
GGCTGGACGG TCTGGCGGGT CTCCCCGAGC AAGTGGCGCT GGATCGGTCC GCTGCACACG
GTCCTGACCA TCACCGTCGT CCTGGCCACC GCGAACCACT ACTGGGCCGA CGGCATCGTC
GGGGTGGCCC TGCTCCTGCT TTCGGCGGGA ATCCAGGCCG CCGCCCGGCG TGGCGCCCGC
TGGATCCGCC GGGCCCGCGT AGCCTCGGCG CAGGTATCCG AACCCGAGCT TGCCAGGAGC
AGTTGA
|
|---|
| Protein sequence | MHWMMPYQMA FWLCGVLMVL AAAMYFSRKP LLVKYLPFPR ELGTVLGLFG LWQVAGRLSV
MKVNGALTRG TWIWDTERDV FLPSEHWIQH LFFPAHPTVV KFFNLYYASM HFTCMIIFLI
WLFIRHREHY ASARTTMALA TAFALAIQLI PVAPPRMIVK AHLVDTALYF HQSVYGPMNA
DSPDQLSAMP SVHVIWAVLV GWTVWRVSPS KWRWIGPLHT VLTITVVLAT ANHYWADGIV
GVALLLLSAG IQAAARRGAR WIRRARVASA QVSEPELARS S
|
|---|
| |