Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1760 |
Symbol | |
ID | 8333103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1990733 |
End bp | 1991566 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644954910 |
Product | GntR domain protein |
Protein accession | YP_003112522 |
Protein GI | 256390958 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGGA CCGCCGCGCC CGTCGACACT CTTCCCGCCC CCTCGCCGGT CGCCAACACC CTCGCCGCGG CCGCCGGCGG CACGATGACC GACTCCTACC TGTCCCTGCG CGCCGGGACC CAGGCCCGCG GCCTGCACGG CCAGCTGGTC CAGCAGCTCG GCCGGATGAT CGTGGCCGGC GAGCTCGGCG CCGACCGGCC GCTGGTGCCC GAGGAGATCG GCCGCCGCTT CGAGGTCTCG CGCACCGTGG TCCGCGAGTC GCTGCGGGTG CTGGAGGCCA AGGGCATGGT GACGGCGCGG CCCAACGTCG GGACCCGGAT CCGCCCGGTG CCGGAGTGGA ACCTGCTGGA CCCGGACGTC ATCGAGTGGC GCGCGGCCGG GGTGGCGGGC CTGGACCAGT GCCGCGAGCT GGCCGAGCTG CGCTGCGCCT TCGAGCCGCT GGCCGCGCAG CTGGCCTCCG GACGCCTCTC GGAGCCCGCC GCGGCCCGGC TCTCGGAGCT GGCCGTGCTG CTGAAGCAGG CCGCCGCCAA CGGCGACCAG CCCGGCTACG CCAAGATCGA CGGCGAGTTC CACGCGCTGC TGGTCGCCGA GTGCCCGAAC CGGATGGTGG AGCACCTGGC GCGGGTGGTG ACCGGCGCGG CCGAGAGCGC GGGGCTGCGG CGCCGTTCCT GCGGGCCGAT GGGCGACGCC GGCGCGGCCG CGCACCAGCG CCTCGCTGAG GAGATCGCGG CCGGCGACGG TGTGGCCGCC GCGAGCGTGA TGCGCGCCAT GCTGGCCGCT CAGCTGGAGG AGCAGTCCGC GGCCTACGGT CTGCCGGGCC AGCGCGGACA GTGA
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Protein sequence | MTGTAAPVDT LPAPSPVANT LAAAAGGTMT DSYLSLRAGT QARGLHGQLV QQLGRMIVAG ELGADRPLVP EEIGRRFEVS RTVVRESLRV LEAKGMVTAR PNVGTRIRPV PEWNLLDPDV IEWRAAGVAG LDQCRELAEL RCAFEPLAAQ LASGRLSEPA AARLSELAVL LKQAAANGDQ PGYAKIDGEF HALLVAECPN RMVEHLARVV TGAAESAGLR RRSCGPMGDA GAAAHQRLAE EIAAGDGVAA ASVMRAMLAA QLEEQSAAYG LPGQRGQ
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