Gene Caci_1760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1760 
Symbol 
ID8333103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1990733 
End bp1991566 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content76% 
IMG OID644954910 
ProductGntR domain protein 
Protein accessionYP_003112522 
Protein GI256390958 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGA CCGCCGCGCC CGTCGACACT CTTCCCGCCC CCTCGCCGGT CGCCAACACC 
CTCGCCGCGG CCGCCGGCGG CACGATGACC GACTCCTACC TGTCCCTGCG CGCCGGGACC
CAGGCCCGCG GCCTGCACGG CCAGCTGGTC CAGCAGCTCG GCCGGATGAT CGTGGCCGGC
GAGCTCGGCG CCGACCGGCC GCTGGTGCCC GAGGAGATCG GCCGCCGCTT CGAGGTCTCG
CGCACCGTGG TCCGCGAGTC GCTGCGGGTG CTGGAGGCCA AGGGCATGGT GACGGCGCGG
CCCAACGTCG GGACCCGGAT CCGCCCGGTG CCGGAGTGGA ACCTGCTGGA CCCGGACGTC
ATCGAGTGGC GCGCGGCCGG GGTGGCGGGC CTGGACCAGT GCCGCGAGCT GGCCGAGCTG
CGCTGCGCCT TCGAGCCGCT GGCCGCGCAG CTGGCCTCCG GACGCCTCTC GGAGCCCGCC
GCGGCCCGGC TCTCGGAGCT GGCCGTGCTG CTGAAGCAGG CCGCCGCCAA CGGCGACCAG
CCCGGCTACG CCAAGATCGA CGGCGAGTTC CACGCGCTGC TGGTCGCCGA GTGCCCGAAC
CGGATGGTGG AGCACCTGGC GCGGGTGGTG ACCGGCGCGG CCGAGAGCGC GGGGCTGCGG
CGCCGTTCCT GCGGGCCGAT GGGCGACGCC GGCGCGGCCG CGCACCAGCG CCTCGCTGAG
GAGATCGCGG CCGGCGACGG TGTGGCCGCC GCGAGCGTGA TGCGCGCCAT GCTGGCCGCT
CAGCTGGAGG AGCAGTCCGC GGCCTACGGT CTGCCGGGCC AGCGCGGACA GTGA
 
Protein sequence
MTGTAAPVDT LPAPSPVANT LAAAAGGTMT DSYLSLRAGT QARGLHGQLV QQLGRMIVAG 
ELGADRPLVP EEIGRRFEVS RTVVRESLRV LEAKGMVTAR PNVGTRIRPV PEWNLLDPDV
IEWRAAGVAG LDQCRELAEL RCAFEPLAAQ LASGRLSEPA AARLSELAVL LKQAAANGDQ
PGYAKIDGEF HALLVAECPN RMVEHLARVV TGAAESAGLR RRSCGPMGDA GAAAHQRLAE
EIAAGDGVAA ASVMRAMLAA QLEEQSAAYG LPGQRGQ