Gene Caci_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1727 
Symbol 
ID8333070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1957038 
End bp1957802 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content73% 
IMG OID644954877 
Productdienelactone hydrolase 
Protein accessionYP_003112489 
Protein GI256390925 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGCA TGCAGATCGC GATGACGAAC GGCATCCAGG CCGGGACGGT CCACTACCCC 
GCGGCCGACG GTGCCGAGAC CGAGGCCTAC CTGGCGGTGC CGCAGGACGA CGCGCCGCGC
GGCGGCGTGG TGCTCATCCA CCACCTGCCC GGGTACGACG AGGCGACGCG GGAGTTCGCG
CGCACCTTCG CCGTCCACGG CTACAACGCG GTCGTCCCCA ACCTGTACAG CCGCGAGGGC
GGTCCGGGCA TCTCGCCCGA GGACGCCGCG GCGGCGGTCC GCGCCGACGG CGGCGTGCCC
GACGAGCGGC TGCTCGCCGA CCTCGGGACG GCGGCGGAGT ACCTGCGCGC GCTGGAGACC
TCCAACGGCA GGATCGGCGT GATCGGCCAC TGCTCCGGCG GACGCCAGGC GCTGCTCGCC
GCGTGCGCGC TGGACCTGCA GGCGGCGGTC GACAACTACG GCGCGTTCGT GATGTCGGAC
AGCCCCGCCT CGGTCGGGCT GCGCGCCACG TCGGTGGAGG AGCGGCTGCC GGAGCTGTCC
TGCCCGCTGC TCGGCAACTT CGGCGCGGAC GACTCGCACC CCTCCCCGGA GGAGACGGCG
CGGCTGGCGG CGGCCCTGGA CAAGCTGGGG AAGACCTACG ACTTCAAGAC CTACGAGGGC
GCCGGGCACG CGTTCTTCAA CGTGAACCGG GTCGCCTACC GGGCTGATGC GGCAATGGAC
GCCTGGGACC GGATCTTCGA CTTCTACGGG CAGCACTTGT CCTAG
 
Protein sequence
MCGMQIAMTN GIQAGTVHYP AADGAETEAY LAVPQDDAPR GGVVLIHHLP GYDEATREFA 
RTFAVHGYNA VVPNLYSREG GPGISPEDAA AAVRADGGVP DERLLADLGT AAEYLRALET
SNGRIGVIGH CSGGRQALLA ACALDLQAAV DNYGAFVMSD SPASVGLRAT SVEERLPELS
CPLLGNFGAD DSHPSPEETA RLAAALDKLG KTYDFKTYEG AGHAFFNVNR VAYRADAAMD
AWDRIFDFYG QHLS