| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1715 |
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| Symbol | |
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| ID | 8333058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1943741 |
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| End bp | 1946749 |
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| Gene Length | 3009 bp |
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| Protein Length | 1002 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644954865 |
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| Product | glycoside hydrolase family 38 |
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| Protein accession | YP_003112477 |
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| Protein GI | 256390913 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0383] Alpha-mannosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.633916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAC TCGTCGTCGT CCCCCACACG CACTGGGACC GCGAGTGGTA CCAGCCCTTC
CAGCGCTTCC GCCTCCGCCT GGTGACCGTC CTGGACCGCC TGCTGGCCCA ACTCGCCGCC
GACCCCCGCA CCCGCTTCAC CCTCGACGGC CAGACCGCCG CCATCGACGA CTACCTGGAG
ATCCGCCCGG AGCAAGAGGC ACTGATCCGC GAGCTGGTCG CACGCGGGCA GCTCGCGCTG
GGCCCGTGGC GCGTGTTGGC GGACTCGTTC CTGTGCTCCG GCGAGAACCT GATCCGCAAC
CTGGAGATCG GCCTGCGCCG CGCGAACGAA CTCGGCGGCG CAATGCGGAT CGGCTACCTG
CCGGACCAGT TCGGCCACAC GGCGCAGCTA CCGCAAATCC TGCAGCTGGC GGGCATCGAG
CAGGCATGCG TCTGGCGCGG CGTACCGGAG GCGGTGCACA CGACGGAGTT CTGGTGGCAA
GCGCCGGACG GCACAGCAGT GCGCACGCGC TACCTGCCCG AGGGCGGCTA CGGCGGCGCA
GCAGGCGTGT TCACAGAGCC CGACCCAGCA GTGGTGCGCC AGCGCGCCGA GGAGCATGCA
CGGGCCCTGC GACACTGGCA GCCGAAGGGC CCGCTCCTGG CAATGTACGG CACGGACCAC
TCGGCACCGG TGGAGGGGCT GGCGGACTTG GTGGCGGGCG CCTCTGGCAA CGCGGAGTCG
GTCCGCATCC GGCTCGACAC CCTCGCAGGG TTCTTCGATA CGGCGACCGA TAACGGTTCC
GGCGCACACA CCGGCACGGC CGAAGCAGGC GAAGGACTCG GCGACGGCAT CGGGGCAGCC
GGCGGCGCGG ATGCTGGATC TCGAGCCGAG AGCCTCAGCA ACAACATCAG AACAGAAAAT
GGATCTGGCA CCGGTAATGC CGAAGGACTT GGCAGCGACA GTGGAGCAGC CCGCGGCGCG
GATGCTGAAT CTGGTGCTGG TGCTGGTGCT GGTGCTGGAG CTGGTGCTGG ATCCAGTGCT
GGTGCTGGTA GCGCCGAACG TCACGGCAGC AGCGGCGCGG ATGCTGGATC TGGTGTTGGT
GCTGAATCTG ATATCGATGG CGCCGGTTCC GGTGGTCCCA TCACCGTCCG GGGCGAGCTG
CGTTCCCATG CGCGAGCCAA CATCCTGCCT GGCGTGTTGT CGTCGCGGGT GGGGCTCAAG
CAGGCGTTGA GTCGGGCTGA GCGGGTGGTT GAGCGGTATG CGGAGCCGGT TGCGGCGCTT
TATGGGGCGG GGGCGGTGTG TCGGCCTTTT TTGGATTTGG CGTGGCGGCG GCTGGTTGAT
TCTTCGTGTC ATGACAGTGT GACGGGCTGC GGGGTTGATG CCACTGCTGA TCAGGTCGCG
GTGCGGATTG CTGAGGCTGG GGATCTGGGG CTCGGGGTGG TTGATCTGGT GTTGGGGGCG
GTTGCGGAGT CTGTGCCTGA TGGTGGGCAG GTGCTGTTCA ATCCGTCGCC GTGGCGGCGG
GCTGAGGTGG TGACGCTGGA GCTGCCGGCG GGGCGGGCCT TGCGGGGTGC TTCTGGTGAG
AAGGTGCTGC ATCAGGTGCT GGACACGGTC GAGGAGTCCT TTGCCGACGA GGTGGTGGCG
CCTGGTGATC TCGACCGGTT TCTGCGGAAG ATTCATGGTC GCGAGCTTTA TGGTCGGCAG
ATCGCCGCGT GGCATGTCGA TCCGGATGCC GCGACCATCG ACTTCGAGCT GGCGACGACG
TCCGATCTGG TCTTCGATGT CGCCTCCGTG CGTGCCGCCG CGGCCGGCGC GACGGTCGAG
GCGTGGTGTG TCGAGGTTCG CGTTCAGCCG CGGGCCACGG TCGCCGCGCT CGTCGATGTC
GGGCCGCTCG CGCTCGGCGC GCTCACCGCG GTGCCCGCCG GCAGTGTCCC GGCTTCGCCG
ATGAAGAACA TCGCTGCCGG CCGGCGTGCG TTGTCCGACC TCGACAACGG CTTGGTGCAC
GTCGCCCTGC GCTCCGACGG GCTCCTGGAC GTCCTCGCCG CCGACGGCAC GCACGCCGCG
GGCCTCGGCG TGGTCGTGGA CGGCGGCGAC CTCGGCGACG AGTACAACTA CGCCCCGCCG
GCGCACGACC GGCTCGTCGA TTCGCCCGAC GAGATCTGGA ACCGGGTGCG CTGGAGCGGT
CCGCTCACCG GGTCGCTGGA ATCAGTGCGC TGGTACAACT GGCCGACCCA CGCCGACGCC
GCCGCCGGCT CCCGCGCCGA CACCGCCCAC ACCACCGAGA TCACCACGCG CCTCGAGCTC
CGGCTCGGCG AACCGTTCGT GCGCCTCAGC ATCGCCTTCG ACAACCGCAG CGACGACCAC
CGCGTCCGCC TCCACCTCCC GCTCCCCCGC CAGGCGACGC ACTCGCACGC CGAGGGGCAG
TTCGCCGTCG TGGACCGGCC GCTGACCGCC GAGGGCGGCT TCGGCGAGCG CCCCGTGCCG
ACGTTCCCGG CGTACGGCTG GGTCGCCGCC GGAGGTTTGG CCGTCCTGCT GGACCACGTC
AGCGAATACG AACTCGTCGA CGACGGCTGC ACCCTCGCGC TCACCCTCCT GCGCTCCGTC
GGCCTGCTCT CGCGCAACGA CAACGCCTGG CGCGAGGAGC CCGCCGGACC ACAGTTGGCA
ACACCGGGCG CGCAATGCCG TGGAGTCCGC ACCGTGGAGC TGGGCCTGTT CCTCTACGCC
GGCGAGTGGC ACACATCAGG GCTCCTCGAC GCCGCAGAGC GCTACCGCCA CCCGTTCACG
ACCCTCGCCG GACGCAGCCA GGACCCGGCG AGCGTCCCCG CGGTCCCGAA GGGAGGCGTC
GAGATCGGCG GACGCGGAGT GGTTCTGAGT AGTTGCCGCG ACGTCGGCGG CGAGGACCCC
GAAGTACGCG TGGTCGCTCT CACGCCGGAA CCGACTACGG CGACGATCCG CACCGCGCAC
GACCACCACC AGGTGACGAT GCGCCCCTGG CAGGTCTCCA CGACCGTCGC CAGGGGCGCG
TCAGGCTGA
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| Protein sequence | MNELVVVPHT HWDREWYQPF QRFRLRLVTV LDRLLAQLAA DPRTRFTLDG QTAAIDDYLE
IRPEQEALIR ELVARGQLAL GPWRVLADSF LCSGENLIRN LEIGLRRANE LGGAMRIGYL
PDQFGHTAQL PQILQLAGIE QACVWRGVPE AVHTTEFWWQ APDGTAVRTR YLPEGGYGGA
AGVFTEPDPA VVRQRAEEHA RALRHWQPKG PLLAMYGTDH SAPVEGLADL VAGASGNAES
VRIRLDTLAG FFDTATDNGS GAHTGTAEAG EGLGDGIGAA GGADAGSRAE SLSNNIRTEN
GSGTGNAEGL GSDSGAARGA DAESGAGAGA GAGAGAGSSA GAGSAERHGS SGADAGSGVG
AESDIDGAGS GGPITVRGEL RSHARANILP GVLSSRVGLK QALSRAERVV ERYAEPVAAL
YGAGAVCRPF LDLAWRRLVD SSCHDSVTGC GVDATADQVA VRIAEAGDLG LGVVDLVLGA
VAESVPDGGQ VLFNPSPWRR AEVVTLELPA GRALRGASGE KVLHQVLDTV EESFADEVVA
PGDLDRFLRK IHGRELYGRQ IAAWHVDPDA ATIDFELATT SDLVFDVASV RAAAAGATVE
AWCVEVRVQP RATVAALVDV GPLALGALTA VPAGSVPASP MKNIAAGRRA LSDLDNGLVH
VALRSDGLLD VLAADGTHAA GLGVVVDGGD LGDEYNYAPP AHDRLVDSPD EIWNRVRWSG
PLTGSLESVR WYNWPTHADA AAGSRADTAH TTEITTRLEL RLGEPFVRLS IAFDNRSDDH
RVRLHLPLPR QATHSHAEGQ FAVVDRPLTA EGGFGERPVP TFPAYGWVAA GGLAVLLDHV
SEYELVDDGC TLALTLLRSV GLLSRNDNAW REEPAGPQLA TPGAQCRGVR TVELGLFLYA
GEWHTSGLLD AAERYRHPFT TLAGRSQDPA SVPAVPKGGV EIGGRGVVLS SCRDVGGEDP
EVRVVALTPE PTTATIRTAH DHHQVTMRPW QVSTTVARGA SG
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