Gene Caci_1677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1677 
Symbol 
ID8333020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand+ 
Start bp1902373 
End bp1902993 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content63% 
IMG OID644954827 
Productcytochrome c oxidase subunit III 
Protein accessionYP_003112439 
Protein GI256390875 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.881512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.222894 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCG TGGCGACAGC AACTGCAACT ACTCAAGCGG GGCAGGCCCA CCGCCTGCCC 
AACCGGCCGA ACCTGGTCAG CGTCGGAACG ATCGTCTGGC TGAGCTCGGA ACTGATGTTC 
TTCGCGGCGC TGTTCGCGAT GTACTTCACG ATCCGCTCAG TGCACGGGTC GCAGTACTTC 
GTGCAGCAGG CCAAGCACCT CAACATGTGG CTCGCCGGAC CGAACACCAC CATCCTGGTG 
CTGTCCTCGG TCACCTGCCA GATGGGTGTG TTCGCGGCCG AGCGTGGGGA CGTGCGGAGG 
CTGCGCTTCT GGTTCATGAT CACGTTCGTC ATGGGCTCGA TCTTCGTCGC CGGCCAGGTC 
TGGGAGTACT CGGCCCTGGT GAAGGAGAAC CTCTCCATCG GCGCGAACGC CTGGACGTCC 
GTGTTCTACC TCACCACCGG GTTCCACGGT ATGCACGTCA CCGGCGGTCT GCTCGCGTTC 
CTGCTGGTGC TGGGCCGGAC CTACCTGGCC AAACGATTCA CCCATGATCA GGCCACCTCC 
GCGATCGTCG TGTCCTACTA CTGGCACTTC GTCGACGTGG TGTGGCTCGG CCTGTTCTTC 
GTCATCTACA TCATGAAGTA G
 
Protein sequence
MAAVATATAT TQAGQAHRLP NRPNLVSVGT IVWLSSELMF FAALFAMYFT IRSVHGSQYF 
VQQAKHLNMW LAGPNTTILV LSSVTCQMGV FAAERGDVRR LRFWFMITFV MGSIFVAGQV 
WEYSALVKEN LSIGANAWTS VFYLTTGFHG MHVTGGLLAF LLVLGRTYLA KRFTHDQATS 
AIVVSYYWHF VDVVWLGLFF VIYIMK