| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1666 |
|---|
| Symbol | |
|---|
| ID | 8333009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 1891612 |
|---|
| End bp | 1892874 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644954816 |
|---|
| Product | Cysteine desulfurase |
|---|
| Protein accession | YP_003112428 |
|---|
| Protein GI | 256390864 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.359858 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTCATT TCGACGCCGC CTCCGCCGAG CCCCCGCACC CGGCCGCCCG TGCCGCGCTG
CTGGCGGCGT TCGAGGAGGG CTGGGCCGAT CCGGCGCGGC TGTACCGGGC CGGGCGGCAG
TCCCGGATGC TGCTGGACCA GGCCCGGGCG GCGGTCGCCG AGGTCCTCGG CTGCCGGGCC
CGGGAGGTGT TTTTCACTCC TTCGGGGACG GCCGCGATCC ATTACGGGGT CGCCGGGGTG
CTCGCCGGGC GGCGGCGGGT CGGGAACCGG CTGGTGGTGT CAGCGGTCGA GCACTCCGCG
GTGCTGCACG CGGCGGAGCT GCATGCCGCG ACGGCTGGGA GCGCCGCCGG CGGCGGCATC
GGCGCAGGTA GCGGCACTGG CGCGGGCGGC GACACGCCCG GCGCCACCGA CACCGACGTC
GCCCCCGACA CCGACACCGA CACCGACACC GAGCCGACGA TCACCGACGT CCTGACCGCC
TCCGGCGTCG TGTCGGTGGT CGGCGTGGAC GGCCTCGGCC GGGTCGACAC CGAAGCCTTC
GCCCGGGAGC TGCGCGTACC GGGAACCGCC CTGGCGTGCC TGCAGGCCGC CAACCACGAG
GTCGGCACGG TGCAGCCGCT GGCGCCGGTG TTCGGCGCCG CCGCCGAGGC CGGGGTGCCG
CTGCTGGTGG ACGCCGCGCA AGTGGTCGGG CGGCTGCCGG TGCCGCGCGA GTGGTCCGTG
CTGTGTGCTT CGTCTCACAA ATGGGGAGGG CCCGCCGGCG TCGGGGTCCT CGCCGTCCGC
AAGGGCACGC GGTTCGCGCC GACGTGGGCT GTCGACGAGC ACGAGGACGG CCGGGTGCCC
GGCGCGGTGA ACCTGCCCGG GATCGTCGCC GCCGCCGCGG CGCTGCTGGC CCGGGAGCAG
GAGCGGGAGG CCGAGGCGGT ACGGCTGCGC GCCCTGACCG AGCGGCTGCG CGCGGTCCTG
CCGACGGTCG CCGACGACAT CGGCGTGTTC GGCGACCCGG ACGAGCGGCT GCCGAACCTG
GTCGCCTTCT CCTGTCCGGC GGTCAACGCC GAGGCGCTGG TCCTGGACCT GGACGAGGCC
GGGTTCGAGG TGTCGTCGGG CTCGGCGTGC ACCTCCGACA CCGTCACCCC GAGCCACGTA
CTGGTCGCCA TGGGCGCCGC GGACCGGGGC AACGTGCGGA TCTCGCTGCC GTTCGGCACG
GCGGAGGAAG ACGTGGACCG CTTCCTCGCC GTGCTGCCCG GTGTGCTGGA GAAGCTGCGC
TGA
|
|---|
| Protein sequence | MTHFDAASAE PPHPAARAAL LAAFEEGWAD PARLYRAGRQ SRMLLDQARA AVAEVLGCRA
REVFFTPSGT AAIHYGVAGV LAGRRRVGNR LVVSAVEHSA VLHAAELHAA TAGSAAGGGI
GAGSGTGAGG DTPGATDTDV APDTDTDTDT EPTITDVLTA SGVVSVVGVD GLGRVDTEAF
ARELRVPGTA LACLQAANHE VGTVQPLAPV FGAAAEAGVP LLVDAAQVVG RLPVPREWSV
LCASSHKWGG PAGVGVLAVR KGTRFAPTWA VDEHEDGRVP GAVNLPGIVA AAAALLAREQ
EREAEAVRLR ALTERLRAVL PTVADDIGVF GDPDERLPNL VAFSCPAVNA EALVLDLDEA
GFEVSSGSAC TSDTVTPSHV LVAMGAADRG NVRISLPFGT AEEDVDRFLA VLPGVLEKLR
|
|---|
| |