Gene Caci_1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1660 
Symbol 
ID8333003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1885502 
End bp1886677 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content76% 
IMG OID644954810 
Productglycerate kinase 
Protein accessionYP_003112422 
Protein GI256390858 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1929] Glycerate kinase 
TIGRFAM ID[TIGR00045] glycerate kinase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.162616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACATCG TCATCGCCAT GGACAAGTTC GCCGGAACGC TCACCGCCCC GGAGGCCGTG 
CGGGCCGTCG CCGAGGGCTG GCTCCGGACC TCGCCGGAGG ACACCGTGAC CGGCGTCCCG
ATGTCGGACG GCGGTCCGGG CTTCCTGGAC GCGCTCGGCG ACGCCTTCCA AGGCCGGGTG
CGCTTCGGCG AGCGGCTGGC GACGGTCAGC GGGCCGCTGG GCGCCGAGGT GACCGGACGC
TACCTGATCG AACTGCGCGG CGGCGCGGCC GGGGACGCCG AGGTCCCGGG CCATCCCACC
GCCTACATCG AGGTCGCCGA GGCCTGCGGG CTGCACCTGA TCCCCGCCGA CGAGCGCGAC
GCCAAGGCCG CGACCACCTA CGGCGTCGGC GAGCTGATCG CCGCGGCTCT GGAGGACGGC
GCCAAGCGCT TGGTCATCGG GCTCGGCGGT ACCTGCACCA CGGACGGCGG CGCTGGCCTG
CTGGCCGCCC TGGGCGCGGA GCCCGCCGAG GTCCTGCGGG CCGGCGGCGG AGCCCTGAGG
AGCCTGCAGA CGCTGGACCT GACCGAGCCG CGCCGCCGGC TGGCCGGCGT CGAGATCGTC
ATCGCCAGCG ACGTCGACAA CCCGCTGCTG GGCCTGCGCG GCGCCGCGGC GGTCTTCGGC
CCGCAGAAGG GCGCGACCGA CGACGACGTC CAGCGCCTCG ACGCCGCCCT GACGCACTTC
GCCGAACTCG CCGGCGCCAT CGGCCAGGAG CCGGGCGCCC TGCGCCGCAC CCTCGACGCC
CCCGGCGCCG GCGCGGGCGG CGGCCTCGGC TACGGCCTGA TGCTCCTGGG CGGCCGCCGC
GTCCCCGGCA TCGGCACGGT CATCACCGAG ACCGGCCTGG CCGACCTGAT CGCCAGCGCG
GACCTGGTCA TCACCGGCGA GGGCCGCTTC GACCACAGCT CGCTGGGCGG CAAGGTCCCC
ACCGGCGTCG CCGAGGCGGC GCTGAAGTCC GGACGCCCCT GCCTGGTACT CGCCGGCCTG
GTCGAGGTGG GCAAGCGCGA GCTGGCCGCC GCCGGCTTCG CCGCCGCCTA CGAGGTCGCC
GAGCAGGCCG GCTCCGCGCA GGAGGCGATG GCCCACGCGG AGTTGCATCT CACGGCCCTG
GCCGAGCGCG TCGCGAAAAG CTGGTCGCAC AGCTGA
 
Protein sequence
MHIVIAMDKF AGTLTAPEAV RAVAEGWLRT SPEDTVTGVP MSDGGPGFLD ALGDAFQGRV 
RFGERLATVS GPLGAEVTGR YLIELRGGAA GDAEVPGHPT AYIEVAEACG LHLIPADERD
AKAATTYGVG ELIAAALEDG AKRLVIGLGG TCTTDGGAGL LAALGAEPAE VLRAGGGALR
SLQTLDLTEP RRRLAGVEIV IASDVDNPLL GLRGAAAVFG PQKGATDDDV QRLDAALTHF
AELAGAIGQE PGALRRTLDA PGAGAGGGLG YGLMLLGGRR VPGIGTVITE TGLADLIASA
DLVITGEGRF DHSSLGGKVP TGVAEAALKS GRPCLVLAGL VEVGKRELAA AGFAAAYEVA
EQAGSAQEAM AHAELHLTAL AERVAKSWSH S