Gene Caci_1656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1656 
Symbol 
ID8332999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1878843 
End bp1880891 
Gene Length2049 bp 
Protein Length682 aa 
Translation table11 
GC content72% 
IMG OID644954806 
ProductPeptidoglycan glycosyltransferase 
Protein accessionYP_003112418 
Protein GI256390854 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.151204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACA AAGACCAGCC CGAAGACCCG CGCCCCGGCC GTCCGCAACG GCCCGCCGAC 
GGCCGAGACG GCCGCGACAG CCGCGATGGC CTCAAGCCGC GCCGCCCGAT TCCCCCCGGC
GCCCGCCCCC ACAAGACCGC CGTGCGCCAG CTCCCGCCGC GTCGCCCGAC CGCCGGTGCC
TCGCCGGCGC CGGCGCGTCC GCGTCCCCCG GGTCCGCGCA CGCCGACGCT GCGCATGGGC
TCTCCGCGTC GCCGGCTGCG CGTCACCATG TTCGGGCTGC TCTTCGCCTT CTCCCTGTTC
GCGGGGCGGC TGTTCCAGCT GCAGGCCGTT GATGCCGGCG GGTACGCGCA GGCCGCCGCG
ACCGGCCGGG AGGCGACCGC CGTCCTGCAC GCCAGCCGCG GCGCCATACT GGCCGCCGAT
GGCACGCCGC TCGCCGTCTC CGTCGAGGCC TACGACGTCA CCGCCGATCC GACCGTGGTC
GCGCGCTATC ACGAGGACGT CGACGAGCTC GCCGGCAAGT TGGCCGGGTT GCTGTCTTCC
GCGCCGGAGT ACGCGCAGGG CGGCGCGCCG AGTGTCTCGG ATCTGCAAGC CGCGCTGACC
AAGGCGGACA CGCGCTACGT CGTGCTGGCG CACAAGGCGT CGCCGGCCAC CTGCGCCAAG
ATCCGGGCGC TGGCGGTGTC CAACACGAGC GATCCGAAGA CGGTCGTCGG GGTCTACACC
AACACCCGCG ACGACCGCCG GACCTATCCC GGCGGGACGC TGGCGGCGAA CGTCATCGGC
TTCACCGACT CCGACGGTGC CGGCAAGGCC GGGATCGAGC AGATGCTGAA CGCGCGGCTG
GCCGGGAAGG ACGGCCAGGA GTCGTATCAG GCGGCGTCCG GGGTGGAGAT CCCGACCACC
GGGGTGAACA TGAAGCCCGC GGTGGACGGC GAGAGCGTCA AGACCACCAT CGACCCCGAC
ATCCAGTGGG CCGCCGATCA GGCGCTGTCC CAGGAGGTGA AGAAGACCGG CTCGCTGTCC
GGGACGGTCG TGGTCGAGGA CGTGAAGACC GGCCAGATCC TGGCGCTGTC GAACTACCCG
AGCTTCGACC CGCGCCACAT CACCTCCGCG GACGTCCCCA ACCTGGGCAA CCGCGCGTTC
ACCGACCCCT TCGAGCCCGG TTCGGTGGCC AAGGTCATCA CCATGTCCGC GGCGATCCAG
ACCGGCGTCG GCGAGCCGGA CACCCAGCTG CCGCCGTTCA CCTCGCCGCA GCACGTCGGG
CGCTACATCT TCAAGGACGA CGTGGACCAC GGCCCGTGGA GCCTGACCAT GACCGGCGTC
CTGGCCGCCT CCTCCAACGT CGGCACCATC GAGGTCGCCG ACCTGTTCCA GCAGCACGGC
GTGGACCGCG ACCAGACCAT CGGCAAGTAC CAGCGGCTGT TCGGCTTCGG CCAGAAGACC
GGCATCGGCT TCCCCGGCGA GAGCGCCGGC CTGCTGGACC CGCCGGCCAA GTGGAGCGAC
ACCGAGCGCT ACACCGTGCT CTACGGCCAG GGCCTGGCCG CCACCGCCGT CCAGGACGCC
TCGGTCTACC AGACCATCGC CAACGGCGGC GTGCGCATCG CCCCGAGCCT GATCCAGGGC
TACACCGACG CCTCCGGCAA GTACACGCCG GCGCCCGCGC CGCAGCAGAC GCCGGTGGTC
AGCGCCGCCA CCGCCTCGAA GGTCGCCGAC ATGCTGGAGG CGGTCACCAC CTCCCAGCGC
GGTACCGGCA CCACGGCGCA GATCCCCGGC TACCGGGTCG CCGGCAAGAC CGGCACGGCG
AACCGCTACG ACGAGAAGAA GGGCACCTAC AACGGCTACA CCGCGTCGTT CATCGGCTTC
GCCCCGACGG ACAAGCCGCA GATCGTCGTC GCGGTCTCGC TGCAGGCGCC GGTCGGCGCG
CACTTCGGCG CCGAGATCGC CGCGCCGGTG TTCACGCAGG TCATGTCCTT CGCGATGCAG
AGCCGGGGCG TCGCGCCGAC GGACACCCCG CCGGCCGATC TGCCGACGAC GTACGGCTCG
GGTCACTGA
 
Protein sequence
MSDKDQPEDP RPGRPQRPAD GRDGRDSRDG LKPRRPIPPG ARPHKTAVRQ LPPRRPTAGA 
SPAPARPRPP GPRTPTLRMG SPRRRLRVTM FGLLFAFSLF AGRLFQLQAV DAGGYAQAAA
TGREATAVLH ASRGAILAAD GTPLAVSVEA YDVTADPTVV ARYHEDVDEL AGKLAGLLSS
APEYAQGGAP SVSDLQAALT KADTRYVVLA HKASPATCAK IRALAVSNTS DPKTVVGVYT
NTRDDRRTYP GGTLAANVIG FTDSDGAGKA GIEQMLNARL AGKDGQESYQ AASGVEIPTT
GVNMKPAVDG ESVKTTIDPD IQWAADQALS QEVKKTGSLS GTVVVEDVKT GQILALSNYP
SFDPRHITSA DVPNLGNRAF TDPFEPGSVA KVITMSAAIQ TGVGEPDTQL PPFTSPQHVG
RYIFKDDVDH GPWSLTMTGV LAASSNVGTI EVADLFQQHG VDRDQTIGKY QRLFGFGQKT
GIGFPGESAG LLDPPAKWSD TERYTVLYGQ GLAATAVQDA SVYQTIANGG VRIAPSLIQG
YTDASGKYTP APAPQQTPVV SAATASKVAD MLEAVTTSQR GTGTTAQIPG YRVAGKTGTA
NRYDEKKGTY NGYTASFIGF APTDKPQIVV AVSLQAPVGA HFGAEIAAPV FTQVMSFAMQ
SRGVAPTDTP PADLPTTYGS GH