| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1643 |
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| Symbol | |
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| ID | 8332986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1862050 |
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| End bp | 1863417 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644954793 |
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| Product | RNA methyltransferase, TrmA family |
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| Protein accession | YP_003112405 |
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| Protein GI | 256390841 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0689931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACGAC CCGCTGACCG CCGCCGCTCC TCCGACCACG CCGCTCAGGC GCGCCCCTCC
GGCGACGCCG TGGGCACCCG TATCGAGGTG GAGGTCGGCG CGCCCGGACA CGGCGGATTC
TGCGTGGCGC GGCACGAGGG GCGCGCGGTG TTCGTGCGCC ACGCGTTGCC GGGGGAGCGG
GTGGTCGCCG AAGTGACCGA GGGCGACTCC AAGGACTCGT TCTGGCGCGC GGACGCGGTG
GAGGTCCTTG AGGCCTCTGA GGACCGCGTC GAGGCGCCGT GCCGGTACGC CGGGCCCGGT
CTGTGCGGCG GCTGCGACTG GCAGCACGCG AGCTACGAGG CGCAGCTCCG GATCAAGGGC
GAGGTCGTCG CCGAGCAGCT GCGGCGGCTG GCGAAGCTGG ACCGCGAGGT CGTCGTCGAG
GAGGTCGCCT CGCCGTTCGG CTGGCGGACC CGCGTGCAGT TCGCGGTGGA TCCCGACGGC
AGCTTGGGGT TCCGCAAGCA CCGTTCCCAT GAAGTCGTCC CTGTTGAGGA ATGCGCCATC
GCGTCCTCCG GAGTCGACGA GGTCGGTGCT CTAGGGCGCC AATGGCCAGG AGTGGAGACG
GTCGAGGTGA TCGCCGCGAC CGGCTCCAAC GACCGGGCTC TGGTGGTCAC GCCTAAGCGT
GGGGAGTCGA TGCCCTTTGT GGACGCGGAC GTAAAGGCGT CCGTACTCCG TGGCGTCTCT
AGGAACACTC ATATCTCCGG CGTACAGCGC ATCCATGGGC GTCCTTACGT ACGTGAGGTC
GCCGAGGGGC GCACCTGGCG GGTCAGCGGC AGCGGCTTCT GGCAGGTACA CCCGGCGGCT
CCGGACGTGC TGACCGAAGC GGTCCTGGAC TTCCTGGACC CGAAGGACGG CGACGTGGCG
CTCGATCTCT ATTGCGGAGT CGGCTTGTTC GCCGCTCCGT TGGCCGAGGC AGTCGGCGAA
AGCGGCGCGG TGCTGGCGGT GGAGCTGGAC CGGCAGGCGG TCCGAGACGC CGCGCACAAC
CTAGGGTTCG CGGACGACGC CGAGGAGAGC ACCGAGTTCC CGTGGGTGGA CCTCGTCGAG
GGGTCCGTGG ACGAGGTCCT GGCCGACGAG GGCTACGTGC CGGATCGGGC GGACGTCGTC
GTCCTGGACC CGCCGCGCGC GGGTGCCGGA CGGGACGTGT GCGCGCGGAT CGCCGCCCTC
GGGCCGCGCG CCGTGGCGTA CGTCGCATGC GACCCCGCGG CTCTGGCTCG GGACGTCGCG
TATCTGGCGG AAGCCGGCTA CGAGCTGACC GACCTGCGCG CCTTCGATCT GTTCCCCATG
ACCCGGCATG TGGAATGCGT GGCGTTGCTG GAACCCGCGC AGCGATAG
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| Protein sequence | MKRPADRRRS SDHAAQARPS GDAVGTRIEV EVGAPGHGGF CVARHEGRAV FVRHALPGER
VVAEVTEGDS KDSFWRADAV EVLEASEDRV EAPCRYAGPG LCGGCDWQHA SYEAQLRIKG
EVVAEQLRRL AKLDREVVVE EVASPFGWRT RVQFAVDPDG SLGFRKHRSH EVVPVEECAI
ASSGVDEVGA LGRQWPGVET VEVIAATGSN DRALVVTPKR GESMPFVDAD VKASVLRGVS
RNTHISGVQR IHGRPYVREV AEGRTWRVSG SGFWQVHPAA PDVLTEAVLD FLDPKDGDVA
LDLYCGVGLF AAPLAEAVGE SGAVLAVELD RQAVRDAAHN LGFADDAEES TEFPWVDLVE
GSVDEVLADE GYVPDRADVV VLDPPRAGAG RDVCARIAAL GPRAVAYVAC DPAALARDVA
YLAEAGYELT DLRAFDLFPM TRHVECVALL EPAQR
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