| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1631 |
|---|
| Symbol | |
|---|
| ID | 8332974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1852659 |
|---|
| End bp | 1853864 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644954781 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003112393 |
|---|
| Protein GI | 256390829 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.182309 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACCT ACGAGCAGGA GCCCGACGGC GGGCGGATCC GCCGTCTGCG CAGACGCGCC
GGGCTCACGC AGGCCGAGTT CGGACAACTC ATGGGCCGTT CCCAGGGCTG GGTGTCGGGC
ATCGAGAACG GCGACCTGGA GCTGGATTCG GTGACCCTGA TCGTACGCGC CGCGAGCGTC
CTGAAGGTCT ATCCCAACGA AATCACCGGA CGCCCCTACG ACCCGGGCAC CCGGGCCGAG
GACCGCGGCC ACCGCGCGAT CCCCGCCCTG CGGCGCGTGG TCTCGCGCCA CGATCTGCCG
CCGGACTGGC CGGTGGAACC GCGCTCGCGC CGGGAGTTGG AAGCCGCGGT GGAGCAGCTG
GCGGTGCTGC GCATGGCCGC GCGCTACGCC GATCTCGGCG AAGCCGCTCC GAACCTCATC
CGGGAGATCC ACGCGGCGGC GTACGTCGCC CGATCCGGGG AGGAGTCCGA ACGGCTCCAC
GGACTCCTCG CGCGGGCGTA TAAGGAAGCG GACACGGTCG CCCACGAGCT CGGCTACGAC
GACCTGTCCA CGCTCACCAC AGAGCGCTTC CGCGCCGCCG CCCAGCGCGC CGGGGACCCG
TGCTTGTCAG TGGTCTTCGA CTACCTGCGG GTCCGCGACT TGTGGGCCGC GGACTTGTGG
CCCGACGCGC TGGATCTGAT CGACGGCGCG ATCGGCTTCG TCGGCGAGCC GCGCCAGAAG
GAGCAGGCGT CGGTGTGGGG CTCGCTCCAA CTGCGCGCGG CGATCACCGC GGCGCTGTCG
TCCAAGGAGG ACGAGGCATG GCAGCGCATC GCCCTGGCCG ACGAGACCGC GCGCCGCCTC
GGCGAGGGGT ACGACCCGTA CAAGCTCGCC TTCTGCTCGG CGAACGTCGA CATCCACAAG
CTCGCGGTGG CGGTGGAGAT CCGCGACGGG GCGCGCGCGG TCGCGCTGGC GTCCCAGACC
CGGCTGCCGG CGAGCTTCCC GGCCTCCCGG CGCGGACGCT TCCATCTGGA CGCCGCGCGC
GGCTGGATCT ACCACGGCGG CTACGACCAA GCGCTGAACG AGATAGAGCG GGCCGAGCGG
ATCGCGCCGC TGCTGGTGCG GAACAACCCG GTCGCGAAGG CCGCCGTGCG CTCGCTGCTG
AGCCACGAGC GGCGCAGCCA GCGGGAGCGG CTGCGGCGTA TGGCGGGGCG GATGCACATC
TCCTGA
|
|---|
| Protein sequence | MATYEQEPDG GRIRRLRRRA GLTQAEFGQL MGRSQGWVSG IENGDLELDS VTLIVRAASV
LKVYPNEITG RPYDPGTRAE DRGHRAIPAL RRVVSRHDLP PDWPVEPRSR RELEAAVEQL
AVLRMAARYA DLGEAAPNLI REIHAAAYVA RSGEESERLH GLLARAYKEA DTVAHELGYD
DLSTLTTERF RAAAQRAGDP CLSVVFDYLR VRDLWAADLW PDALDLIDGA IGFVGEPRQK
EQASVWGSLQ LRAAITAALS SKEDEAWQRI ALADETARRL GEGYDPYKLA FCSANVDIHK
LAVAVEIRDG ARAVALASQT RLPASFPASR RGRFHLDAAR GWIYHGGYDQ ALNEIERAER
IAPLLVRNNP VAKAAVRSLL SHERRSQRER LRRMAGRMHI S
|
|---|
| |