| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1623 |
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| Symbol | |
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| ID | 8332966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1846466 |
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| End bp | 1847347 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644954773 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_003112385 |
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| Protein GI | 256390821 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.195256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTCG ACGGCCTGCC GGCCCGCACC ACCCTGACCA AGGGCCACGG CACCGAGAAC
GACTTCGTCA TCGTCCCGGA CCCGGACGGC ACGCTGGAGA TCGCGCCCTC GCGCGTCGCC
GCGCTGTGCG ACCGGCGAGC CGGGATCGGC GCCGACGGCG TGCTGCGCGT GGTGCGCACC
GCCCGCATGC CCGGGTACGA AGACCAGGCC GCGGAGGCGG AGTTCTTCAT GGACTACCGC
AACGCCGACG GCAGCGTGGC CGAGATGTGC GGCAACGGCG TCCGTGTCTT CGCGCTGTTC
GTCACGGCGC GCGGACTGGT CAAGGGCGGC GGCGTCGGCG AACCGGTGGA GTTCGCCGTG
GGCACGCGCG GCGGGATCAA GCGCGTGACG CTGAGGGCCA CCGGCGAGAA CACCGCGGAC
GTGACCGTCG ACATGGGCAT CCCGGTGTTC CCGACCGAAC GCGGCGCCGT CACGGTCGAC
GTCCACGGGA CGCCGCGCGA CGCAGTGGAC GTGGATATGG GGAATCCGCA CGCTGTCGTC
TTCGTGGACT CCACCGACGA TGCCGGATCT CTCTATGAGA TGCCCACTGT GTCGCCCACA
GGCGTCTACG CAGAGGGCGT CAACGTGGAG TTCGCCGCGG ACGTCGCTCC GCGCCACCTC
GCCATGCGCG TCTACGAACG CGGCGTCGGC GAGACGCGTT CCTGCGGCAC CGGAGCCTGC
GCGGTGATGA TCGCCGCCGC GCGCCGCGAC GCCGCGGACG CCGGGACCGA GTACACCGTG
GACGTTCTCG GCGGCCGGCT GCGCTTCGTC GAGCGCGCCG ACGGCCACCT GGAGATGACC
GGGCCGGCGG CGCTGGTCTT CGACATCATG GAGTCCCGCT GA
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| Protein sequence | MILDGLPART TLTKGHGTEN DFVIVPDPDG TLEIAPSRVA ALCDRRAGIG ADGVLRVVRT
ARMPGYEDQA AEAEFFMDYR NADGSVAEMC GNGVRVFALF VTARGLVKGG GVGEPVEFAV
GTRGGIKRVT LRATGENTAD VTVDMGIPVF PTERGAVTVD VHGTPRDAVD VDMGNPHAVV
FVDSTDDAGS LYEMPTVSPT GVYAEGVNVE FAADVAPRHL AMRVYERGVG ETRSCGTGAC
AVMIAAARRD AADAGTEYTV DVLGGRLRFV ERADGHLEMT GPAALVFDIM ESR
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