Gene Caci_1551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1551 
Symbol 
ID8332890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1751749 
End bp1753125 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content68% 
IMG OID644954697 
Producthypothetical protein 
Protein accessionYP_003112313 
Protein GI256390749 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0416519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG ACAGCCTGGA CAAATCCGCC TACGACCACC TCTGGATGCA CTTCACGCGG 
ATGTCGGGGT ACCGGGACAA CCCGGTGCCG ACCATCGTCC GCGGCGAGGG CGCGCGCATC
TTCGACAGTA ACGGCAAGCG CTACCTGGAC GGCTTGGCGG GCCTGTTCGT CGTGCAGGCC
GGGCACGGCC GCGTCGAGCT CGCGGAGGCG GCCTACAAAC AGGCTCAGGA GCTGGCGTTC
TTCCCGCTGT GGAGCTACGC GCACCCGCAG GCGATCGAGC TGGCCGACCG GCTGGCGCAC
TATGCCCCGG GCGACCTGAA CAAGGTCTTC TTCACCACCG GCGGCGGCGA GGCCGTGGAG
ACCGCCTGGA AGCTGGCCAA GCAGTACTTC AAGCTGGTCG GCCAGCCGAT GAAGCACAAG
GTGATCTCCC GCAACATCGC CTACCACGGC ACCCCGCACG GCGCGCTGTC CATCACCGGC
ATCCCGGACG CCAAGAAGTA CTTCGAGCCG CTGGTCCCCG GCGCGCACAA GGTTCCGAAC
ACCAACTACT ACCGCGCGGA CGAGATCACC GGCGTGCCCG GCATGAGCGA GGAGGAGTTC
GGGATCTGGT GCGCCAACCA GGTCGAGAAC ATGATCCTCA CCGAGGGCGC GGACACGGTC
GCGGCGGTGT TCGTCGAGCC GGTGCAGAAC TCCGGCGGCT GCTTCCCGCC GCCGCCGGGA
TACTTCCGGC GGCTGCGCGA GATCTGCGAC CAGTACGACG TCCTGATGGT CTCCGACGAG
GTCATCTGCG CCTTCGGCCG GCTGGGCACG ATGTTCGCCT GCGACAAGTT CGACTACGTC
CCGGACATCA TCACCTGCGC CAAGGGCATG ACCTCCGGCT ACTCGCCGAT CGGCGCGACC
ATCGTCTCCG ACCGCGTCGC CGCACCCTTC TACGAGGGCA CCAACTACTT CCCGCACGGC
TACACCTTCG GCGGGCACCC GGTCTCCTCG GCGGTGGCGC TGGCGAACCT GGAGCTGTTC
GAGCGCGAGG GCCTGAACCA GCACGTGCTG GACCACGAGG GCGCGTTCCG CTCGACGCTG
GAGAAGCTCA CGGACCTGCC GATCGTCGGC GACGTCCGCG GCGACGGCTT CTTCTACGGC
ATCGAGCTGG TGAAGGACAA GGCGACCAAG GAGACCTTCG ACGACGACGA GTCCGAGCGC
CTGCTGCGCG GCTTCCTGTC CAAGGCGCTG TTCGACGCCG GCCTGTACTG CCGCGCCGAC
GACCGCGGCG ACCCGGTGGT GCAGCTCGCG CCGCCGCTGA TCGTCGGGCA GAGCGAGTTC
GACGAGATCG AGCAGACGCT GCGCTCGGTG CTGACCGAGG CCTGGACCCG GCTGTAG
 
Protein sequence
MSTDSLDKSA YDHLWMHFTR MSGYRDNPVP TIVRGEGARI FDSNGKRYLD GLAGLFVVQA 
GHGRVELAEA AYKQAQELAF FPLWSYAHPQ AIELADRLAH YAPGDLNKVF FTTGGGEAVE
TAWKLAKQYF KLVGQPMKHK VISRNIAYHG TPHGALSITG IPDAKKYFEP LVPGAHKVPN
TNYYRADEIT GVPGMSEEEF GIWCANQVEN MILTEGADTV AAVFVEPVQN SGGCFPPPPG
YFRRLREICD QYDVLMVSDE VICAFGRLGT MFACDKFDYV PDIITCAKGM TSGYSPIGAT
IVSDRVAAPF YEGTNYFPHG YTFGGHPVSS AVALANLELF EREGLNQHVL DHEGAFRSTL
EKLTDLPIVG DVRGDGFFYG IELVKDKATK ETFDDDESER LLRGFLSKAL FDAGLYCRAD
DRGDPVVQLA PPLIVGQSEF DEIEQTLRSV LTEAWTRL