Gene Caci_1534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1534 
Symbol 
ID8332873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1738857 
End bp1739648 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content72% 
IMG OID644954680 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003112296 
Protein GI256390732 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0444471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTGC ACGCTGCCGA GGTCCGCGCC GACGGCTCCG CGATCCGCTG GACCGAACTT 
CCCGGCACCG AGCCGGCCCG CGTCTACATC CACGGCCTCG GGGGCAGCTC GGCCCACTGC
TTCGCCGAGG TCGCCGCCAG CGACGGTCTG CGCGGCCGGC GCTCCCTGCT GCTGGACCTG
CTCGGGTTCG GCGTCAGCGA CCGGCCCGTC GACGCCGACT ACGCCCTGGA GGACCACGCC
GACTGGGTCG CCATCGCGCT GCGCGAGGCC GGCGTCTCCG GCGCGCAGAT CCTCGCGCAC
AGCATGGGCG GCTCGATCGC GACCGTACTC GCCCTCCGGC ATCCGGACCT GGTCTCCGGC
CTGGTGCTGA TCGACTCGAA CCTAGACCCG GCGCCGGAGA TCCCGCGTCC CGGCTCCTCG
CAGATCGCAA GGTACGGCGA GACCGTGTTC CTGCGCGGAG GCGGCTACGA GGAGACGCTG
GAGAAGGTGC ATCCCGGCTG GCGCGCGACC ATGCGGCTGG CCGGCGCGGT GGCGCTGTAC
CGCAGCGCCG CCAACCTGGT GCGGTTCGAG GGACGCGCGA TCCTGAAGAC GCTCGACGTC
CCGCGGACTT ACCTCTACCC CGCCTCGGAC GGTCCGCTGA AGGGGGCTGA GGAGCTGACC
GCCTCCGGAG TGAACGTCGT CGCCCTGCCG GATTGCGGAC ACAACATCAC GCTGGACAAC
CCGACGGGTT TCGTAGAGGC GGTGCTCGCG GCGGAGAACG CTCCTGAGGA CGCCATGGTG
CGCGCCGCCT AA
 
Protein sequence
MTLHAAEVRA DGSAIRWTEL PGTEPARVYI HGLGGSSAHC FAEVAASDGL RGRRSLLLDL 
LGFGVSDRPV DADYALEDHA DWVAIALREA GVSGAQILAH SMGGSIATVL ALRHPDLVSG
LVLIDSNLDP APEIPRPGSS QIARYGETVF LRGGGYEETL EKVHPGWRAT MRLAGAVALY
RSAANLVRFE GRAILKTLDV PRTYLYPASD GPLKGAEELT ASGVNVVALP DCGHNITLDN
PTGFVEAVLA AENAPEDAMV RAA